RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 HPCAP84074 193 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 ARHGAP11BQ3KRB8 267 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 C8orf82Q6P1X6 216 aaPredicted RBP15.72■□□□□ 0.11
NUP88-210ENST00000574867 NUP54Q7Z3B4 507 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 FAM13CQ8NE31 585 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 TMEM125Q96AQ2 219 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 EFHD2Q96C19 240 aaPredicted RBP15.72■□□□□ 0.11
NUP88-210ENST00000574867 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.72■□□□□ 0.11
NUP88-210ENST00000574867 KAT8Q9H7Z6 458 aaKnown RBP15.72■□□□□ 0.11
NUP88-210ENST00000574867 TIMMDC1Q9NPL8 285 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 HS6ST1O60243 411 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 NEURL1O76050 574 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 F10P00742 488 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 GUSBP08236 651 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 ATP6V1C1P21283 382 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 FBXW4P57775 412 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 GNA13Q14344 377 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 FIGNL1Q6PIW4 674 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 EXD3Q8N9H8 876 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 MDS2Q8NDY4 140 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 TMCO6Q96DC7 493 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 ADOQ96SZ5 270 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 SPATA9Q9BWV2 254 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 POLE3Q9NRF9 147 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 TRAV17A0A0B4J275 112 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 K7EM74 188 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 UGT2B11O75310 529 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 TNFRSF21O75509 655 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 SLC25A12O75746 678 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 UBOX5O94941 541 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 RFX3P48380 749 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 SELPLGQ14242 412 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 RABL3Q5HYI8 236 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 GCNT6Q5T4J0 391 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 SERPINA11Q86U17 422 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 OR10G3Q8NGC4 313 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 PAQR8Q8TEZ7 354 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 HGDQ93099 445 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 C5orf34Q96MH7 638 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 SIGLEC12Q96PQ1 595 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 TRNT1Q96Q11 434 aaKnown RBP15.71■□□□□ 0.11
NUP88-210ENST00000574867 UBL7Q96S82 380 aaPredicted RBP15.71■□□□□ 0.11
NUP88-210ENST00000574867 SDF2Q99470 211 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 TRIM8Q9BZR9 551 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 ZNF350Q9GZX5 532 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 SH2D2AQ9NP31 389 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 A4GALTQ9NPC4 353 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 L3MBTL1Q9Y468 752 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 PCDHGB6Q9Y5F9 930 aa15.71■□□□□ 0.11
NUP88-210ENST00000574867 CHCHD2Q9Y6H1 151 aaPredicted RBP15.71■□□□□ 0.11
NUP88-210ENST00000574867 STX11O75558 287 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 IGKV1D-16P01601 117 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 CD46P15529 392 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 ST13P50502 369 aaKnown RBP15.71■□□□□ 0.1
NUP88-210ENST00000574867 MXRA7P84157 204 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 FUT5Q11128 374 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 CYP51A1Q16850 503 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 CCNJQ5T5M9 372 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 SPINK14Q6IE38 97 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 TMEM81Q6P7N7 255 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 C16orf89Q6UX73 402 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 ZNF227Q86WZ6 799 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 METTL25Q8N6Q8 603 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 PSD4Q8NDX1 1056 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 SLC25A18Q9H1K4 315 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 TMEM38AQ9H6F2 299 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 SPAG4Q9NPE6 437 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 CALML5Q9NZT1 146 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 CNIH4Q9P003 139 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 LHX6Q9UPM6 363 aa15.71■□□□□ 0.1
NUP88-210ENST00000574867 T-ENOLP0DO92 83 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 NR2F1P10589 423 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 CYP4B1P13584 511 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 CD97P48960 835 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 GPAT3Q53EU6 434 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 Q6ZS92 163 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 NET1Q7Z628 596 aaPredicted RBP15.7■□□□□ 0.1
NUP88-210ENST00000574867 PGAM4Q8N0Y7 254 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 FBXW8Q8N3Y1 598 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 TMEM178AQ8NBL3 297 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 OR5M3Q8NGP4 307 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 SPPL2AQ8TCT8 520 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 ECSITQ9BQ95 431 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 ZNF71Q9NQZ8 489 aaPredicted RBP15.7■□□□□ 0.1
NUP88-210ENST00000574867 SACM1LQ9NTJ5 587 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 ABCG2Q9UNQ0 655 aa15.7■□□□□ 0.1
NUP88-210ENST00000574867 P04436 131 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 NGFRP08138 427 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 ARAFP10398 606 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 CRISP3P54108 245 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 PSME3P61289 254 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 RBBP4Q09028 425 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 ZNF169Q14929 603 aaPredicted RBP15.69■□□□□ 0.1
NUP88-210ENST00000574867 ZNF630Q2M218 657 aaPredicted RBP15.69■□□□□ 0.1
NUP88-210ENST00000574867 TBCELQ5QJ74 424 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 PRAMEF8Q5VWM4 474 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 PRAMEF7Q5VXH5 474 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 AP1ARQ63HQ0 302 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 SLC22A10Q63ZE4 541 aa15.69■□□□□ 0.1
NUP88-210ENST00000574867 C6orf89Q6UWU4 347 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms