RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 RCBTB1Q8NDN9 531 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 OR9Q2Q8NGE9 314 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 GFM1Q96RP9 751 aaKnown RBP27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 PRODH2Q9UF12 536 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 RARRES3Q9UL19 164 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 NDRG4Q9ULP0 352 aaKnown RBP27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 PCDHGA5Q9Y5G8 931 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 TRBV4-1A0A0J9YWV2 114 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 GXYLT2A0PJZ3 443 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 SYNDIG1LA6NDD5 238 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 E9PQ18 207 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 HRKO00198 91 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 CYP4B1P13584 511 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 IFNA8P32881 189 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 PGDP52209 483 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 NPTX1Q15818 432 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 MINDY4Q4G0A6 757 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 RBM48Q5RL73 367 aaKnown RBP27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 ZNF836Q6ZNA1 936 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 HDAC2Q92769 488 aaKnown RBP27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 OR6C1Q96RD1 312 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 PITX2Q99697 317 aa27.05■■□□□ 1.92
CTDNEP1-208ENST00000573600 A0A087WXM4 84 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 C17orf105B2RV13 164 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 KHNYNO15037 678 aaKnown RBP27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 KCNK2O95069 426 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 ATP6V1B1P15313 513 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 RAPSNQ13702 412 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 C1orf189Q5VU69 101 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 ZNF770Q6IQ21 691 aaPredicted RBP27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 FIGNL1Q6PIW4 674 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 PARP8Q8N3A8 854 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 AQP11Q8NBQ7 271 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 NIPSNAP1Q9BPW8 284 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 FUZQ9BT04 418 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 ARRDC1-AS1Q9H2J1 176 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 MGAT4BQ9UQ53 548 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 ADAP00813 363 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 FUT4P22083 530 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 TRHRP34981 398 aaPredicted RBP27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 RGS8P57771 180 aaPredicted RBP27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 EEF1A1P68104 462 aaKnown RBP27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 TOP3AQ13472 1001 aaPredicted RBP27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 TSPYL5Q86VY4 417 aaPredicted RBP27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 CLIP4Q8N3C7 705 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 ZNF615Q8N8J6 731 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 FAM192AQ9GZU8 254 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 ARMC7Q9H6L4 198 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 EVA1AQ9H8M9 152 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 Q9N2J8 555 aa27.04■■□□□ 1.92
CTDNEP1-208ENST00000573600 AP3D1O14617 1153 aa27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 TFAP2AP05549 437 aa27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 CCNYL3P0C7X3 344 aa27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 NR1H2P55055 460 aa27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 RHAGQ02094 409 aa27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 CD47Q08722 323 aa27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 C16orf52Q8NHV5 167 aa27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 FBLIM1Q8WUP2 373 aa27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 HRASLS5Q96KN8 279 aa27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 PNO1Q9NRX1 252 aaKnown RBP27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 FBXO34Q9NWN3 711 aa27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 GPR55Q9Y2T6 319 aaPredicted RBP27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 PCDHGB2Q9Y5G2 931 aa27.03■■□□□ 1.92
CTDNEP1-208ENST00000573600 ATXN8OSP0DMR3 200 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 NID1P14543 1247 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 ELK4P28324 431 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 TAS2R41P59536 307 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 RPP38P78345 283 aaKnown RBP27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 IL5RAQ01344 420 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 C6orf141Q5SZD1 244 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 RNF220Q5VTB9 566 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 TMEM151BQ8IW70 566 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 PTPMT1Q8WUK0 201 aaPredicted RBP27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 SMOC1Q9H4F8 434 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 TCRBV16S1A1N1A0A5B0 115 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 SH3PXD2BA1X283 911 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 NTN3O00634 580 aaPredicted RBP27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 OR10H3O60404 316 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 GASTP01350 101 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 HBQ1P09105 142 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 GRK6P43250 576 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 NUP107P57740 925 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 TRA2AQ13595 282 aaKnown RBP eCLIP27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 ELAVL1Q15717 326 aaKnown RBP27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 VWA2Q5GFL6 755 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 BPHLQ86WA6 291 aaPredicted RBP27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 SLITRK4Q8IW52 837 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 SLC7A13Q8TCU3 470 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 TGIF2Q9GZN2 237 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 ANKRD19PQ9H560 264 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 SIDT1Q9NXL6 827 aaKnown RBP27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 CFL2Q9Y281 166 aa27.02■■□□□ 1.92
CTDNEP1-208ENST00000573600 TRIM64CA6NLI5 447 aa27.01■■□□□ 1.91
CTDNEP1-208ENST00000573600 SEC23BQ15437 767 aa27.01■■□□□ 1.91
CTDNEP1-208ENST00000573600 MAPK14Q16539 360 aa27.01■■□□□ 1.91
CTDNEP1-208ENST00000573600 MEP1AQ16819 746 aa27.01■■□□□ 1.91
CTDNEP1-208ENST00000573600 FLYWCH1Q4VC44 716 aa27.01■■□□□ 1.91
CTDNEP1-208ENST00000573600 PHF19Q5T6S3 580 aa27.01■■□□□ 1.91
CTDNEP1-208ENST00000573600 TSLPQ969D9 159 aa27.01■■□□□ 1.91
CTDNEP1-208ENST00000573600 SENP5Q96HI0 755 aaPredicted RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms