RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 FADS6Q8N9I5 356 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 MBD3L2Q8NHZ7 208 aaPredicted RBP15.73■□□□□ 0.11
SMG6-212ENST00000573153 CIDECQ96AQ7 238 aaPredicted RBP15.73■□□□□ 0.11
SMG6-212ENST00000573153 EFHD2Q96C19 240 aaPredicted RBP15.73■□□□□ 0.11
SMG6-212ENST00000573153 C3orf30Q96M34 536 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 ZIM3Q96PE6 472 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 KCNJ16Q9NPI9 418 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 ALKBH4Q9NXW9 302 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 ZDHHC2Q9UIJ5 367 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 CD8B2A6NJW9 211 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 TMEM114B3SHH9 223 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 FAM47E-STBD1D6RA91 191 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 ZIC3O60481 467 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 CBR3O75828 277 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 CPN1P15169 458 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 MAPK1P28482 360 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 TLE4Q04727 773 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 ZNF155Q12901 538 aaPredicted RBP15.72■□□□□ 0.11
SMG6-212ENST00000573153 GAB1Q13480 694 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 MLC1Q15049 377 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 LARP4Q71RC2 724 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMG6-212ENST00000573153 R3HCC1LQ7Z5L2 792 aaKnown RBP15.72■□□□□ 0.11
SMG6-212ENST00000573153 PLCZ1Q86YW0 608 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 NUDCD3Q8IVD9 361 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 OR10Q1Q8NGQ4 319 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 ZFP28Q8NHY6 868 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 GFM2Q969S9 779 aaKnown RBP15.72■□□□□ 0.11
SMG6-212ENST00000573153 PPCDCQ96CD2 204 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 ZBED6CLQ96FA7 236 aaPredicted RBP15.72■□□□□ 0.11
SMG6-212ENST00000573153 DOCK7Q96N67 2140 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 TSSK3Q96PN8 268 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 MCCC2Q9HCC0 563 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 DDX18Q9NVP1 670 aaKnown RBP15.72■□□□□ 0.11
SMG6-212ENST00000573153 KLRF1Q9NZS2 232 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 BAIAP2L1Q9UHR4 511 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 ATP6V1HQ9UI12 483 aa15.72■□□□□ 0.11
SMG6-212ENST00000573153 MRPS18CQ9Y3D5 142 aaKnown RBP15.72■□□□□ 0.11
SMG6-212ENST00000573153 SERPINE1P05121 402 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 DDX5P17844 614 aaKnown RBP15.71■□□□□ 0.11
SMG6-212ENST00000573153 GRK2P25098 689 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 IL12BP29460 328 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 SRD5A2P31213 254 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 KRT20P35900 424 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 RPL3P39023 403 aaKnown RBP15.71■□□□□ 0.11
SMG6-212ENST00000573153 LHX2P50458 406 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 CLDN15P56746 228 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 CLDN18P56856 261 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 TESK1Q15569 626 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 SLC25A35Q3KQZ1 300 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 FBXL19-AS1Q494R0 122 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 GALNTL6Q49A17 601 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 ATP6AP1LQ52LC2 224 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 C6orf136Q5SQH8 315 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 OR5M10Q6IEU7 315 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 PLXDC2Q6UX71 529 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 APOOLQ6UXV4 268 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 LACC1Q8IV20 430 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 PM20D2Q8IYS1 436 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 C9orf106Q8NAJ2 232 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 CLHC1Q8NHS4 586 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 NUDT8Q8WV74 236 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 ABTB1Q969K4 478 aaPredicted RBP15.71■□□□□ 0.11
SMG6-212ENST00000573153 DTNBP1Q96EV8 351 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 TUBA1CQ9BQE3 449 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 SIRT3Q9NTG7 399 aaPredicted RBP15.71■□□□□ 0.11
SMG6-212ENST00000573153 HAO1Q9UJM8 370 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 ABCG2Q9UNQ0 655 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 OR10H1Q9Y4A9 318 aa15.71■□□□□ 0.11
SMG6-212ENST00000573153 PCNX3Q9H6A9 2034 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 GXYLT2A0PJZ3 443 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 LYPLA1O75608 230 aaPredicted RBP15.7■□□□□ 0.1
SMG6-212ENST00000573153 ZWINTO95229 277 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 ACTL6AO96019 429 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 PRPS2P11908 318 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 POU3F2P20265 443 aaPredicted RBP15.7■□□□□ 0.1
SMG6-212ENST00000573153 EVI2BP34910 448 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 C21orf58P58505 322 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 ZNHIT3Q15649 155 aaPredicted RBP15.7■□□□□ 0.1
SMG6-212ENST00000573153 SMU1Q2TAY7 513 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 CEP85LQ5SZL2 805 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 AGR3Q8TD06 166 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 PKNOX2Q96KN3 472 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 UCN2Q96RP3 112 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 Q9N2J8 555 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 ASIC5Q9NY37 505 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 JKAMPQ9P055 326 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 CLCF1Q9UBD9 225 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 CBLCQ9ULV8 474 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 CAMK2AQ9UQM7 478 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.7■□□□□ 0.1
SMG6-212ENST00000573153 CELSR1Q9NYQ6 3014 aa15.7■□□□□ 0.1
SMG6-212ENST00000573153 FAM221AA4D161 298 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 ENO4A6NNW6 628 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 HSPB2A8KAH6 182 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 SCAMP2O15127 329 aaKnown RBP15.69■□□□□ 0.1
SMG6-212ENST00000573153 AKAP10O43572 662 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 PEX11AO75192 247 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 NKX2-2O95096 273 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 IL33O95760 270 aa15.69■□□□□ 0.1
SMG6-212ENST00000573153 ZNF708P17019 499 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms