RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PHF21BQ96EK2 531 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 ELOVL6Q9H5J4 265 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 FOLH1BQ9HBA9 442 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 UTS2RQ9UKP6 389 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 CD5LO43866 347 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 CTAGE8P0CG41 777 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 FCGR2AP12318 317 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 CDKN1AP38936 164 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 RPS3AP61247 264 aaKnown RBP17.8■□□□□ 0.44
CCDC40-206ENST00000572083 CALCOCO2Q13137 446 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 SGCBQ16585 318 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 ERCC6LQ2NKX8 1250 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 MROH9Q5TGP6 573 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 CTAGE4Q8IX94 777 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 METTL25Q8N6Q8 603 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 OR6K3Q8NGY3 331 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 RAB3IL1Q8TBN0 382 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 FBF1Q8TES7 1133 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 GFM2Q969S9 779 aaKnown RBP17.8■□□□□ 0.44
CCDC40-206ENST00000572083 MRRFQ96E11 262 aaKnown RBP17.8■□□□□ 0.44
CCDC40-206ENST00000572083 NTMT1Q9BV86 223 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 FAIM2Q9BWQ8 316 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 ACTR6Q9GZN1 396 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 STMN4Q9H169 189 aaPredicted RBP17.8■□□□□ 0.44
CCDC40-206ENST00000572083 ZBTB26Q9HCK0 441 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 FLRT3Q9NZU0 649 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 PCTPQ9UKL6 214 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 EMC9Q9Y3B6 208 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 OR10H1Q9Y4A9 318 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 SVEP1Q4LDE5 3571 aa17.8■□□□□ 0.44
CCDC40-206ENST00000572083 SHISA8B8ZZ34 492 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 CCDC188H7C350 402 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 TLX2O43763 284 aaPredicted RBP17.79■□□□□ 0.44
CCDC40-206ENST00000572083 BCAS2O75934 225 aaPredicted RBP17.79■□□□□ 0.44
CCDC40-206ENST00000572083 KLHL2O95198 593 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 PLGP00747 810 aaPredicted RBP17.79■□□□□ 0.44
CCDC40-206ENST00000572083 PDYNP01213 254 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 ALDOAP04075 364 aaKnown RBP17.79■□□□□ 0.44
CCDC40-206ENST00000572083 GSTA2P09210 222 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 ACVR1BP36896 505 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 SLC6A8P48029 635 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 GANABQ14697 944 aaKnown RBP17.79■□□□□ 0.44
CCDC40-206ENST00000572083 METTL2BQ6P1Q9 378 aaKnown RBP17.79■□□□□ 0.44
CCDC40-206ENST00000572083 KLC3Q6P597 504 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 RPS27LQ71UM5 84 aaKnown RBP17.79■□□□□ 0.44
CCDC40-206ENST00000572083 C1orf52Q8N6N3 182 aaKnown RBP17.79■□□□□ 0.44
CCDC40-206ENST00000572083 OR4F6Q8NGB9 312 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 GPR78Q96P69 363 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 HBEGFQ99075 208 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 PRRG4Q9BZD6 226 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 RTN4RQ9BZR6 473 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 PLSCR4Q9NRQ2 329 aa17.79■□□□□ 0.44
CCDC40-206ENST00000572083 A0A096LPK6 155 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 CCDC189A1A4V9 331 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 GMFGO60234 142 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 ESRRBO95718 433 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 SOD3P08294 240 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 STX2P32856 288 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 IDUAP35475 653 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 EIF1AXP47813 144 aaKnown RBP17.78■□□□□ 0.44
CCDC40-206ENST00000572083 OCRLQ01968 901 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 ZNF155Q12901 538 aaPredicted RBP17.78■□□□□ 0.44
CCDC40-206ENST00000572083 ETFDHQ16134 617 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 TECRLQ5HYJ1 363 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 SH2D4BQ5SQS7 431 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 CCDC25Q86WR0 208 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 UHMK1Q8TAS1 419 aaKnown RBP17.78■□□□□ 0.44
CCDC40-206ENST00000572083 GTPBP3Q969Y2 492 aaKnown RBP17.78■□□□□ 0.44
CCDC40-206ENST00000572083 EXOSC8Q96B26 276 aaKnown RBP17.78■□□□□ 0.44
CCDC40-206ENST00000572083 TRMT61AQ96FX7 289 aaKnown RBP17.78■□□□□ 0.44
CCDC40-206ENST00000572083 PTGES2Q9H7Z7 377 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 WHRNQ9P202 907 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 PRR14LQ5THK1 2151 aa17.78■□□□□ 0.44
CCDC40-206ENST00000572083 HMX2A2RU54 273 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 LINC01387J3KSC0 135 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 OVOL3O00110 214 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 EIF1AYO14602 144 aaKnown RBP17.77■□□□□ 0.44
CCDC40-206ENST00000572083 CLOCKO15516 846 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 PHF1O43189 567 aaPredicted RBP17.77■□□□□ 0.44
CCDC40-206ENST00000572083 CTBP2P56545 445 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 MRPS22P82650 360 aaKnown RBP17.77■□□□□ 0.44
CCDC40-206ENST00000572083 ZNF844Q08AG5 666 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 CTU2Q2VPK5 515 aaKnown RBP17.77■□□□□ 0.44
CCDC40-206ENST00000572083 CHRFAM7AQ494W8 412 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 GGTA1PQ4G0N0 100 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 LGSNQ5TDP6 509 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 CCDC91Q7Z6B0 441 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 MILR1Q7Z6M3 343 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 GGNQ86UU5 652 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 OR7G2Q8NG99 324 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 LILRB1Q8NHL6 650 aaPredicted RBP17.77■□□□□ 0.44
CCDC40-206ENST00000572083 SELENOMQ8WWX9 145 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 ERP27Q96DN0 273 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 MTBPQ96DY7 904 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 C1GALT1C1Q96EU7 318 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 ZBED6CLQ96FA7 236 aaPredicted RBP17.77■□□□□ 0.44
CCDC40-206ENST00000572083 GMPPAQ96IJ6 420 aaPredicted RBP17.77■□□□□ 0.44
CCDC40-206ENST00000572083 SLCO5A1Q9H2Y9 848 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 GRHL1Q9NZI5 618 aa17.77■□□□□ 0.44
CCDC40-206ENST00000572083 SENP1Q9P0U3 644 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms