RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 TBX19O60806 448 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 TUBBP07437 444 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 MYZAPP0CAP1 466 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 LAMP1P11279 417 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 BGNP21810 368 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 STARP49675 285 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 GAS1P54826 345 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 TFF3Q07654 80 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 NHSL2Q5HYW2 709 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 RIPPLY2Q5TAB7 128 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 TRIM42Q8IWZ5 723 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 HOMEZQ8IX15 550 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 ZNF295-AS1Q8N0V1 137 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 KRTCAP2Q8N6L1 136 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 TNIP2Q8NFZ5 429 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 JADE3Q92613 823 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 C16orf58Q96GQ5 468 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 ZNF764Q96H86 408 aaPredicted RBP16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 RTN4RQ9BZR6 473 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 OR2B2Q9GZK3 357 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 C20orf27Q9GZN8 174 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 PRDM14Q9GZV8 571 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 SSU72Q9NP77 194 aaKnown RBP16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 ACSS1Q9NUB1 689 aaPredicted RBP16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 ATP6V1HQ9UI12 483 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 MRTO4Q9UKD2 239 aaKnown RBP16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 PCDHGB3Q9Y5G1 929 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 SNX8Q9Y5X2 465 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 NCOA6Q14686 2063 aaPredicted RBP16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 A0A1W2PRB8 838 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 BIRC5O15392 142 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 ZWINTO95229 277 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 KCNH1O95259 989 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 UTS2O95399 124 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 IL33O95760 270 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 EPPINO95925 133 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 IGKV1D-16P01601 117 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 ACP2P11117 423 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 SRD5A2P31213 254 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 FRKP42685 505 aaPredicted RBP16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 SLC1A6P48664 564 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 CPTPQ5TA50 214 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 PLXDC2Q6UX71 529 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 LRIG3Q6UXM1 1119 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 MARCH3Q86UD3 253 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 IFNEQ86WN2 208 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 NAXEQ8NCW5 288 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 CEP70Q8NHQ1 597 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 MTERF3Q96E29 417 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 CHMP6Q96FZ7 201 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 SFXN2Q96NB2 322 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 MS4A4EQ96PG1 132 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 SPOCK3Q9BQ16 436 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 ENKD1Q9H0I2 346 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 DSN1Q9H410 356 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 C3orf14Q9HBI5 128 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 ZCCHC3Q9NUD5 404 aaKnown RBP16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 MED11Q9P086 117 aa16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 EIF3LQ9Y262 564 aaKnown RBP16.16■□□□□ 0.18
CTDNEP1-207ENST00000572043 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 FAM47E-STBD1D6RA91 191 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 H0Y3Z8 333 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 EMC8O43402 210 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 ACTL6AO96019 429 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 DHRS4L1P0CG22 281 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 G6PDP11413 515 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 DDX5P17844 614 aaKnown RBP16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 BMP5P22003 454 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 DPP4P27487 766 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 MSX1P28360 303 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 RPL3P39023 403 aaKnown RBP16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 AGFG1P52594 562 aaKnown RBP16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 SNTB1Q13884 538 aaKnown RBP16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 TNFAIP8L3Q5GJ75 292 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 FIGNL1Q6PIW4 674 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 CDRT4Q8N9R6 151 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 MGARPQ8TDB4 240 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 RNF138Q8WVD3 245 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 GIMAP5Q96F15 307 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 PGM2Q96G03 612 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 TBL1XR1Q9BZK7 514 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 SIRT3Q9NTG7 399 aaPredicted RBP16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 NCKAP5O14513 1909 aa16.15■□□□□ 0.18
CTDNEP1-207ENST00000572043 HSPB2A8KAH6 182 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 FADS1O60427 444 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 NKX2-2O95096 273 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 C6orf47O95873 294 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 IFI6P09912 130 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 CLK3P49761 638 aaKnown RBP16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 PSMD4P55036 377 aaKnown RBP16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 STX3Q13277 289 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 HSPB2Q16082 182 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 DUSP5Q16690 384 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 PGS1Q32NB8 556 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 GRAMD1BQ3KR37 738 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 SPDYE7PQ495Y7 208 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 VPS26BQ4G0F5 336 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 CCNJQ5T5M9 372 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 HHATQ5VTY9 493 aa16.14■□□□□ 0.17
CTDNEP1-207ENST00000572043 MFSD12Q6NUT3 480 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms