RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 PTPN6P29350 595 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 CLDN8P56748 225 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 C21orf58P58505 322 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 ZNF630Q2M218 657 aaPredicted RBP13.28□□□□□ -0.28
LITAF-208ENST00000571627 EIPR1Q53HC9 387 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 CPTPQ5TA50 214 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 TMEM211Q6ICI0 200 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 SLC30A6Q6NXT4 461 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 TMEM81Q6P7N7 255 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 SZRD1Q7Z422 152 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 CCDC71Q8IV32 467 aaPredicted RBP13.28□□□□□ -0.28
LITAF-208ENST00000571627 OR7A2PQ8NGA2 310 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 FBXO30Q8TB52 745 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 LRRC8CQ8TDW0 803 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 DYDC1Q8WWB3 177 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 MARVELD3Q96A59 401 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 TMCO6Q96DC7 493 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 SERHLQ9NQF3 203 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 INTS9Q9NV88 658 aaKnown RBP13.28□□□□□ -0.28
LITAF-208ENST00000571627 FLRT3Q9NZU0 649 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 HCFC1P51610 2035 aa13.27□□□□□ -0.28
LITAF-208ENST00000571627 PCNX3Q9H6A9 2034 aa13.27□□□□□ -0.28
LITAF-208ENST00000571627 TTC36A6NLP5 189 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 ABCB7O75027 752 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 HPNP05981 417 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 KITP10721 976 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 CYP4B1P13584 511 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 ELAVL4P26378 380 aaKnown RBP13.27□□□□□ -0.29
LITAF-208ENST00000571627 RFX3P48380 749 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 PRKAG1P54619 331 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 SNTA1Q13424 505 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 GAB1Q13480 694 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 EFR3AQ14156 821 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 MLC1Q15049 377 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 WIPI1Q5MNZ9 446 aaPredicted RBP13.27□□□□□ -0.29
LITAF-208ENST00000571627 DCST1Q5T197 706 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 OGFOD2Q6N063 350 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 SPATA19Q7Z5L4 167 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 YRDCQ86U90 279 aaKnown RBP13.27□□□□□ -0.29
LITAF-208ENST00000571627 WDR75Q8IWA0 830 aaKnown RBP13.27□□□□□ -0.29
LITAF-208ENST00000571627 RIMKLAQ8IXN7 391 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 KRTCAP2Q8N6L1 136 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 WDSUB1Q8N9V3 476 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 FAM83FQ8NEG4 500 aaPredicted RBP13.27□□□□□ -0.29
LITAF-208ENST00000571627 PIWIL2Q8TC59 973 aaKnown RBP13.27□□□□□ -0.29
LITAF-208ENST00000571627 CA5BP1Q8WTZ4 195 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 RND1Q92730 232 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 COQ8BQ96D53 544 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 BHLHE41Q9C0J9 482 aaPredicted RBP13.27□□□□□ -0.29
LITAF-208ENST00000571627 C3orf14Q9HBI5 128 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 COQ3Q9NZJ6 369 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 CBLCQ9ULV8 474 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 RNF6Q9Y252 685 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 WIF1Q9Y5W5 379 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 APCP25054 2843 aa13.27□□□□□ -0.29
LITAF-208ENST00000571627 A0A1W2PRB8 838 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 GXYLT2A0PJZ3 443 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 FAM90A27PA6NNH2 459 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 SDHDO14521 159 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 SCO2O43819 266 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 GLI4P10075 376 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 LAMP1P11279 417 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 FBN2P35556 2912 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 PNLIPRP2P54317 469 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 CRYZQ08257 329 aaKnown RBP13.26□□□□□ -0.29
LITAF-208ENST00000571627 ZNHIT3Q15649 155 aaPredicted RBP13.26□□□□□ -0.29
LITAF-208ENST00000571627 LSM12Q3MHD2 195 aaKnown RBP13.26□□□□□ -0.29
LITAF-208ENST00000571627 C1orf185Q5T7R7 199 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 OR5M10Q6IEU7 315 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 B3GNT6Q6ZMB0 384 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 CAMKMTQ7Z624 323 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 GALNT10Q86SR1 603 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 ULK2Q8IYT8 1036 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 INTS1Q8N201 2190 aaKnown RBP13.26□□□□□ -0.29
LITAF-208ENST00000571627 OR10Q1Q8NGQ4 319 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 CEP70Q8NHQ1 597 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 RNF138Q8WVD3 245 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 OR5P2Q8WZ92 322 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 PIK3R3Q92569 461 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 OTUB1Q96FW1 271 aaPredicted RBP13.26□□□□□ -0.29
LITAF-208ENST00000571627 C7orf26Q96N11 449 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 TTYH2Q9BSA4 534 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 LMF2Q9BU23 707 aaKnown RBP13.26□□□□□ -0.29
LITAF-208ENST00000571627 DPY30Q9C005 99 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 MARCOQ9UEW3 520 aaPredicted RBP13.26□□□□□ -0.29
LITAF-208ENST00000571627 FBXL2Q9UKC9 423 aa13.26□□□□□ -0.29
LITAF-208ENST00000571627 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.25□□□□□ -0.29
LITAF-208ENST00000571627 NKX2-6A6NCS4 301 aa13.25□□□□□ -0.29
LITAF-208ENST00000571627 KDM4EB2RXH2 506 aaPredicted RBP13.25□□□□□ -0.29
LITAF-208ENST00000571627 B4DXG7 233 aa13.25□□□□□ -0.29
LITAF-208ENST00000571627 HNRNPRO43390 633 aaKnown RBP13.25□□□□□ -0.29
LITAF-208ENST00000571627 WDR1O75083 606 aa13.25□□□□□ -0.29
LITAF-208ENST00000571627 PRF1P14222 555 aa13.25□□□□□ -0.29
LITAF-208ENST00000571627 TCEA1P23193 301 aaKnown RBP13.25□□□□□ -0.29
LITAF-208ENST00000571627 CHRNB4P30926 498 aa13.25□□□□□ -0.29
LITAF-208ENST00000571627 GABRA3P34903 492 aa13.25□□□□□ -0.29
LITAF-208ENST00000571627 EVI2BP34910 448 aa13.25□□□□□ -0.29
LITAF-208ENST00000571627 ADH7P40394 386 aa13.25□□□□□ -0.29
LITAF-208ENST00000571627 CLNS1AP54105 237 aaKnown RBP13.25□□□□□ -0.29
LITAF-208ENST00000571627 GAS1P54826 345 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms