RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 ACANP16112 2415 aa11.93□□□□□ -0.5
SPG7-221ENST00000569720 VPS13CQ709C8 3753 aa11.93□□□□□ -0.5
SPG7-221ENST00000569720 FLNAP21333 2647 aaKnown RBP11.93□□□□□ -0.5
SPG7-221ENST00000569720 CLCA1A8K7I4 914 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 TRIM13O60858 407 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 SBK3P0C264 359 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 IMPDH1P20839 514 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 GRK2P25098 689 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 SOX18P35713 384 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 GSTM5P46439 218 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 PNLIPRP2P54317 469 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 GFRA1P56159 465 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 UNC50Q53HI1 259 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 TCHHL1Q5QJ38 904 aaPredicted RBP11.92□□□□□ -0.5
SPG7-221ENST00000569720 ZNF678Q5SXM1 525 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 HHATQ5VTY9 493 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 LARP4Q71RC2 724 aaKnown RBP eCLIP11.92□□□□□ -0.5
SPG7-221ENST00000569720 CHMP1BQ7LBR1 199 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 LUZP2Q86TE4 346 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 CCDC63Q8NA47 563 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 KAT2AQ92830 837 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 EXOSC8Q96B26 276 aaKnown RBP11.92□□□□□ -0.5
SPG7-221ENST00000569720 INTS12Q96CB8 462 aaKnown RBP11.92□□□□□ -0.5
SPG7-221ENST00000569720 SFXN2Q96NB2 322 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 BTBD9Q96Q07 612 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 UCN2Q96RP3 112 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 ADOQ96SZ5 270 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 TRMOQ9BU70 441 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 SHCBP1LQ9BZQ2 653 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 PIGMQ9H3S5 423 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 OXSMQ9NWU1 459 aa11.92□□□□□ -0.5
SPG7-221ENST00000569720 MRPS18CQ9Y3D5 142 aaKnown RBP11.92□□□□□ -0.5
SPG7-221ENST00000569720 CASKO14936 926 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 SPAG7O75391 227 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 ENO1P06733 434 aaKnown RBP11.91□□□□□ -0.5
SPG7-221ENST00000569720 CT45A8P0DMV1 189 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 CT45A9P0DMV2 189 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 FOSL1P15407 271 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 MPIP34949 423 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 LHX2P50458 406 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 FOXF2Q12947 444 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 FOXD4Q12950 439 aaPredicted RBP11.91□□□□□ -0.5
SPG7-221ENST00000569720 CT45A2Q5DJT8 189 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 LIPMQ5VYY2 423 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 P4HA3Q7Z4N8 544 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 ADGRE4PQ86SQ3 457 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 GRAMD2AQ8IUY3 354 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 FAM9CQ8IZT9 166 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 OR4K17Q8NGC6 315 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 OR9A2Q8NGT5 310 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 FAM76AQ8TAV0 307 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 C16orf78Q8WTQ4 265 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 L3HYPDHQ96EM0 354 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 DACH2Q96NX9 599 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 FAM111AQ96PZ2 611 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 TMEM237Q96Q45 408 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 BBS4Q96RK4 519 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 ACPTQ9BZG2 426 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 FOLH1BQ9HBA9 442 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 SLC35C2Q9NQQ7 365 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 GALNT8Q9NY28 637 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 FAM53CQ9NYF3 392 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 TAS2R9Q9NYW1 312 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 NDRG3Q9UGV2 375 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 EMCNQ9ULC0 261 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 OR10H1Q9Y4A9 318 aa11.91□□□□□ -0.5
SPG7-221ENST00000569720 NAV3Q8IVL0 2385 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 SH3D21A4FU49 640 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 PLOD2O00469 737 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 KLF11O14901 512 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 DLX3O60479 287 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 PLOD3O60568 738 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 TSPAN2O60636 221 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 COQ9O75208 318 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 ATE1O95260 518 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 BPGMP07738 259 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 ANXA4P09525 319 aaPredicted RBP11.9□□□□□ -0.5
SPG7-221ENST00000569720 CHN1P15882 459 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 DPP4P27487 766 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 TIA1P31483 386 aaKnown RBP eCLIP11.9□□□□□ -0.5
SPG7-221ENST00000569720 STARP49675 285 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 PKNOX1P55347 436 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 CORO7P57737 925 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 RAE1P78406 368 aaKnown RBP11.9□□□□□ -0.5
SPG7-221ENST00000569720 LCP2Q13094 533 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 DEFB113Q30KQ7 82 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 ATG16L1Q676U5 607 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 OR2A2Q6IF42 318 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 NUDCD3Q8IVD9 361 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 SLC44A2Q8IWA5 706 aaPredicted RBP11.9□□□□□ -0.5
SPG7-221ENST00000569720 GCNT2Q8N0V5 402 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 POM121Q96HA1 1249 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 VSTM2LQ96N03 204 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 ANKRA2Q9H9E1 313 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 NEUROD4Q9HD90 331 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 INTS9Q9NV88 658 aaKnown RBP11.9□□□□□ -0.5
SPG7-221ENST00000569720 CLCF1Q9UBD9 225 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 FBXL2Q9UKC9 423 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 PACSIN3Q9UKS6 424 aa11.9□□□□□ -0.5
SPG7-221ENST00000569720 EIF3LQ9Y262 564 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms