RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 C5orf51A6NDU8 294 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 TM9SF1O15321 606 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 SYNGR4O95473 234 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 AREGP15514 252 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 GABRR1P24046 479 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 HOXD10P28358 340 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 MAGEA4P43358 317 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 CCL11P51671 97 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 UBXN1Q04323 297 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 EGFEM1PQ0D2K5 195 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 RCN2Q14257 317 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 C16orf72Q14CZ0 275 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 RAB35Q15286 201 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 PKN2Q16513 984 aaKnown RBP1.93□□□□□ -2.1
UBR1-209ENST00000569243 ZSWIM7Q19AV6 140 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 SMU1Q2TAY7 513 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 CXCL17Q6UXB2 119 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 FRA10AC1Q70Z53 315 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 PARGQ86W56 976 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 CSNK1A1LQ8N752 337 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 OR10H4Q8NGA5 316 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 PSMA8Q8TAA3 256 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 TMEM45BQ96B21 275 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 FGGYQ96C11 551 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 DHTKD1Q96HY7 919 aaPredicted RBP1.93□□□□□ -2.1
UBR1-209ENST00000569243 JAKMIP1Q96N16 626 aaKnown RBP1.93□□□□□ -2.1
UBR1-209ENST00000569243 CNPY3Q9BT09 278 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 C2orf40Q9H1Z8 148 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 ABCG8Q9H221 673 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 ZNF331Q9NQX6 463 aaPredicted RBP1.93□□□□□ -2.1
UBR1-209ENST00000569243 ONECUT1Q9UBC0 465 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 GALPQ9UBC7 116 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 SMC3Q9UQE7 1217 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 RLFQ13129 1914 aa1.93□□□□□ -2.1
UBR1-209ENST00000569243 ZMYM6O95789 1325 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 IGHV7-81A0A0B4J1V7 117 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 K7ENP7 123 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 SDC3O75056 442 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 LRP3O75074 770 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 CENPBP07199 599 aaPredicted RBP1.92□□□□□ -2.1
UBR1-209ENST00000569243 HNRNPA2B1P22626 353 aaKnown RBP1.92□□□□□ -2.1
UBR1-209ENST00000569243 RPS6P62753 249 aaKnown RBP1.92□□□□□ -2.1
UBR1-209ENST00000569243 NME3Q13232 169 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 DPYSQ14117 519 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 HERPUD1Q15011 391 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 ZNF57Q68EA5 555 aaPredicted RBP1.92□□□□□ -2.1
UBR1-209ENST00000569243 TMEM270Q6UE05 265 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 HSD17B13Q7Z5P4 300 aaPredicted RBP1.92□□□□□ -2.1
UBR1-209ENST00000569243 YRDCQ86U90 279 aaKnown RBP1.92□□□□□ -2.1
UBR1-209ENST00000569243 ZNF410Q86VK4 478 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 ZNF397Q8NF99 534 aaPredicted RBP1.92□□□□□ -2.1
UBR1-209ENST00000569243 EEF2KMTQ96G04 330 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 TMEM80Q96HE8 168 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 CBWD1Q9BRT8 395 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 NDUFAF3Q9BU61 184 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 CARD6Q9BX69 1037 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 SLC5A7Q9GZV3 580 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 PATZ1Q9HBE1 687 aaKnown RBP1.92□□□□□ -2.1
UBR1-209ENST00000569243 PRMT8Q9NR22 394 aaPredicted RBP1.92□□□□□ -2.1
UBR1-209ENST00000569243 DCAF13Q9NV06 445 aaKnown RBP1.92□□□□□ -2.1
UBR1-209ENST00000569243 COMMD8Q9NX08 183 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 EXOSC1Q9Y3B2 195 aaKnown RBP1.92□□□□□ -2.1
UBR1-209ENST00000569243 L3MBTL1Q9Y468 752 aa1.92□□□□□ -2.1
UBR1-209ENST00000569243 SMIM30A4D0T7 59 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 DHRS7CA6NNS2 312 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 ERVV-1B6SEH8 477 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 TBL1XO60907 577 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 ATP6V1G1O75348 118 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 GPX5O75715 221 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 BBOX1O75936 387 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 CD55P08174 381 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 CYP11B1P15538 503 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 TMOD1P28289 359 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 MARCKSP29966 332 aaPredicted RBP1.91□□□□□ -2.1
UBR1-209ENST00000569243 SLC6A8P48029 635 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 PPOXP50336 477 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 EMDP50402 254 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 GPC3P51654 580 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 CNN1P51911 297 aaKnown RBP1.91□□□□□ -2.1
UBR1-209ENST00000569243 NOP14P78316 857 aaKnown RBP1.91□□□□□ -2.1
UBR1-209ENST00000569243 BCL2L1Q07817 233 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 SLC39A12Q504Y0 691 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 DLEU7Q6UYE1 221 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 HACD2Q6Y1H2 254 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 GOLGA7Q7Z5G4 137 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 AMZ2Q86W34 360 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 GPBP1Q86WP2 473 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 SERPINA12Q8IW75 414 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 ZNF561Q8N587 486 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 ZNF433Q8N7K0 673 aaPredicted RBP1.91□□□□□ -2.1
UBR1-209ENST00000569243 FBXO30Q8TB52 745 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 ANKRD49Q8WVL7 239 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 TAF4BQ92750 862 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 PTP4A1Q93096 173 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 MCHR2Q969V1 340 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 DEFB118Q96PH6 123 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 OR51J1Q9H342 316 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 PNO1Q9NRX1 252 aaKnown RBP1.91□□□□□ -2.1
UBR1-209ENST00000569243 MARCH5Q9NX47 278 aa1.91□□□□□ -2.1
UBR1-209ENST00000569243 GAKO14976 1311 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 391.4 ms