RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 OR10A4Q9H209 315 aa14.18□□□□□ -0.14
HERPUD1-215ENST00000568676 VPS11Q9H270 941 aa14.18□□□□□ -0.14
HERPUD1-215ENST00000568676 PAQR5Q9NXK6 330 aaPredicted RBP14.18□□□□□ -0.14
HERPUD1-215ENST00000568676 MRTO4Q9UKD2 239 aaKnown RBP14.18□□□□□ -0.14
HERPUD1-215ENST00000568676 EMC9Q9Y3B6 208 aa14.18□□□□□ -0.14
HERPUD1-215ENST00000568676 OR10H1Q9Y4A9 318 aa14.18□□□□□ -0.14
HERPUD1-215ENST00000568676 AP4B1Q9Y6B7 739 aa14.18□□□□□ -0.14
HERPUD1-215ENST00000568676 UQCRHLA0A096LP55 91 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 COQ9O75208 318 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 PHBP35232 272 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 CLDN15P56746 228 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 CORO7P57737 925 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 MRPS25P82663 173 aaKnown RBP14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 PON3Q15166 354 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 CYP27C1Q4G0S4 372 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 ZNF704Q6ZNC4 412 aaPredicted RBP14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 SLC44A2Q8IWA5 706 aaPredicted RBP14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 C1orf52Q8N6N3 182 aaKnown RBP14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 OR6K3Q8NGY3 331 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 FNDC9Q8TBE3 224 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 MTBPQ96DY7 904 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 NSUN5Q96P11 429 aaKnown RBP14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 C1QTNF3Q9BXJ4 246 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 KLHL4Q9C0H6 718 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 DSN1Q9H410 356 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 FOLH1BQ9HBA9 442 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 PLSCR4Q9NRQ2 329 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 SENP1Q9P0U3 644 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 ADAM21Q9UKJ8 722 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 ZNF337Q9Y3M9 751 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 DSCAMO60469 2012 aa14.17□□□□□ -0.14
HERPUD1-215ENST00000568676 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 KRT6AP02538 564 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 KRT6BP04259 564 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 RPS17P08708 135 aaKnown RBP14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 IL11P20809 199 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 KRT6CP48668 564 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 SUCLG1P53597 346 aaKnown RBP14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 PSMD4P55036 377 aaKnown RBP14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 ATP5J2P56134 94 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 CSTF3Q12996 717 aaKnown RBP14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 UAP1Q16222 522 aaPredicted RBP14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 SGCBQ16585 318 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 NPSR1Q6W5P4 371 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 FAM9CQ8IZT9 166 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 OR9A2Q8NGT5 310 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 UHMK1Q8TAS1 419 aaKnown RBP14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 EFHD2Q96C19 240 aaPredicted RBP14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 GRPEL1Q9HAV7 217 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 GLRX2Q9NS18 164 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 FARSBQ9NSD9 589 aaKnown RBP14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 FAM120CQ9NX05 1096 aaKnown RBP14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 XPR1Q9UBH6 696 aa14.16□□□□□ -0.14
HERPUD1-215ENST00000568676 TLN2Q9Y4G6 2542 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 A0A087WV62 115 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 OR2M5A3KFT3 312 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 B4DXG7 233 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 H3BML4 177 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 HS3ST1O14792 307 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 SEC14L5O43304 696 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 KLF4O43474 513 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 SCO2O43819 266 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 FADS1O60427 444 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 SOX30O94993 753 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 TCEA1P23193 301 aaKnown RBP14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 MAGEA12P43365 314 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 PSG6Q00889 435 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 DMTNQ08495 405 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 DECR1Q16698 335 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 SPIN4Q56A73 249 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 HEPHL1Q6MZM0 1159 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 FAM180BQ6P0A1 224 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 LETMD1Q6P1Q0 360 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 BEND4Q6ZU67 534 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 STK32CQ86UX6 486 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 PLD6Q8N2A8 252 aaKnown RBP14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 ZNF483Q8TF39 744 aaPredicted RBP14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 KAT2AQ92830 837 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 MRRFQ96E11 262 aaKnown RBP14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 C1GALT1C1Q96EU7 318 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 GMPPAQ96IJ6 420 aaPredicted RBP14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 MRPL57Q9BQC6 102 aaKnown RBP14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 TMEM204Q9BSN7 226 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 MRPL46Q9H2W6 279 aaKnown RBP14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 ACSS3Q9H6R3 686 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 SLC35C2Q9NQQ7 365 aa14.15□□□□□ -0.14
HERPUD1-215ENST00000568676 GNG14A0A1W2PPG7 69 aa14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 PCDH7O60245 1069 aa14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 PLGP00747 810 aaPredicted RBP14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 IFNA2P01563 188 aa14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 THBDP07204 575 aa14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 IL3P08700 152 aa14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 CTBP2P56545 445 aa14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 CLDN20P56880 219 aa14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 C17orf67Q0P5P2 114 aa14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 RASA2Q15283 850 aa14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 ADAM5Q6NVV9 412 aa14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 ZDHHC24Q6UX98 284 aa14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 ANP32BQ92688 251 aaKnown RBP14.14□□□□□ -0.15
HERPUD1-215ENST00000568676 EXOSC8Q96B26 276 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms