RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ACTN3Q08043 901 aaPredicted RBP2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 MRPL28Q13084 256 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 KRT31Q15323 416 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 TIMM50Q3ZCQ8 353 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 SLC22A6Q4U2R8 563 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 UTF1Q5T230 341 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 RTL6Q6ICC9 239 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 CGB2Q6NT52 195 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 CDC42EP5Q6NZY7 148 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 SASS6Q6UVJ0 657 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 PAMR1Q6UXH9 720 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 RUFY3Q7L099 469 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 ADCK1Q86TW2 530 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 C11orf53Q8IXP5 236 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 PEX5LQ8IYB4 626 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 LINC00518Q8N0U6 118 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 TEX9Q8N6V9 391 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 MSANTD4Q8NCY6 345 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 FBXO25Q8TCJ0 367 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 SLCO4A1Q96BD0 722 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 CABS1Q96KC9 395 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 MCCC1Q96RQ3 725 aaPredicted RBP2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 TCHPQ9BT92 498 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 SLITRK2Q9H156 845 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 TNMDQ9H2S6 317 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 VCX3BQ9H321 246 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 AMBNQ9NP70 447 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 PIGVQ9NUD9 493 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 DCAF16Q9NXF7 216 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 HOXC10Q9NYD6 342 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 CYP39A1Q9NYL5 469 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 IL20Q9NYY1 176 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 RABL2AQ9UBK7 228 aaPredicted RBP2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 EIF3KQ9UBQ5 218 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 Q9UF83 564 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 IKZF3Q9UKT9 509 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 BARX2Q9UMQ3 279 aaPredicted RBP2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 TRAF3IP3Q9Y228 551 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 SNX5Q9Y5X3 404 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 USP54Q70EL1 1684 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 TULP4Q9NRJ4 1543 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 ARFGEF1Q9Y6D6 1849 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 OVOS2A0A0G2JMS6 1433 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 OVOS2A0A0J9YW53 1432 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 OVOS2Q6IE36 1432 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 KIAA1551Q9HCM1 1747 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 F8VZ95 297 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 LRRTM2O43300 516 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 LRP3O75074 770 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 STAM2O75886 525 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 YEATS4O95619 227 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 RHOXF2BP0C7M4 288 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 UCP1P25874 307 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 CHRNA3P32297 505 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 BRCC3P46736 316 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 PITPNBP48739 271 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 CNN1P51911 297 aaKnown RBP2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 TEFQ10587 303 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 NPRL3Q12980 569 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 RUNX3Q13761 415 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 TGIF1Q15583 401 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 PRR30Q53SZ7 412 aaPredicted RBP2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 SLC10A5Q5PT55 438 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 SEL1L2Q5TEA6 688 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 PRAMEF7Q5VXH5 474 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 NKAIN2Q5VXU1 208 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 ABRAXAS1Q6UWZ7 409 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 ADAMTSL5Q6ZMM2 481 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 MOB2Q70IA6 237 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 ITPRIPQ8IWB1 547 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 SLC22A18ASQ8N1D0 253 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 GPD1LQ8N335 351 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 CD177Q8N6Q3 437 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 BEST4Q8NFU0 473 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 CRYGNQ8WXF5 182 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 CTNNBL1Q8WYA6 563 aaPredicted RBP2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 BIRC7Q96CA5 298 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 LRRC45Q96CN5 670 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 DTNBP1Q96EV8 351 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 DTD2Q96FN9 168 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 PIWIL1Q96J94 861 aaKnown RBP2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 RPGRIP1Q96KN7 1286 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 ACCSQ96QU6 501 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 RUFY1Q96T51 708 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 RHOXF2Q9BQY4 288 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 XPO4Q9C0E2 1151 aaKnown RBP2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 TMEM245Q9H330 911 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 DCTPP1Q9H773 170 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 MID1IP1Q9NPA3 183 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 TNFRSF19Q9NS68 423 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 ABCC13Q9NSE7 274 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 EPS15L1Q9UBC2 864 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 TUBGCP4Q9UGJ1 667 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 RSPH14Q9UHP6 348 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 NARFQ9UHQ1 456 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 RPH3AQ9Y2J0 694 aaPredicted RBP2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 ABCC6O95255 1503 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 CUL9Q8IWT3 2517 aa2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 POLR3AO14802 1390 aaPredicted RBP2.86□□□□□ -1.95
HERPUD1-212ENST00000567944 ANKRD30BQ9BXX2 1392 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms