RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 TBC1D3Q8IZP1 549 aaPredicted RBP15.7■□□□□ 0.1
CMTM3-213ENST00000566756 ACOT4Q8N9L9 421 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 CAPSLQ8WWF8 208 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 TM9SF4Q92544 642 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 OSTF1Q92882 214 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 C12orf66Q96MD2 445 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 NEDD4LQ96PU5 975 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 PHOX2BQ99453 314 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 KATNB1Q9BVA0 655 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 PLA2G12AQ9BZM1 189 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 SLC38A1Q9H2H9 487 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 TP63Q9H3D4 680 aaPredicted RBP15.7■□□□□ 0.1
CMTM3-213ENST00000566756 GIMAP4Q9NUV9 329 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 SLC13A4Q9UKG4 626 aa15.7■□□□□ 0.1
CMTM3-213ENST00000566756 SPTBN5Q9NRC6 3674 aaKnown RBP15.7■□□□□ 0.1
CMTM3-213ENST00000566756 A0A1W2PR48 441 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 MEIOCA2RUB1 952 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 GSAPA4D1B5 854 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 FAM170BA6NMN3 283 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 NARSO43776 548 aaKnown RBP15.69■□□□□ 0.1
CMTM3-213ENST00000566756 HCN1O60741 890 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 HLA-DQB1P01920 261 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 ALPPP05187 535 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 HOXC4P09017 264 aaPredicted RBP15.69■□□□□ 0.1
CMTM3-213ENST00000566756 CFL1P23528 166 aaKnown RBP15.69■□□□□ 0.1
CMTM3-213ENST00000566756 FPR3P25089 353 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 SDC2P34741 201 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 MPIP34949 423 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 BCL6P41182 706 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 DECR1Q16698 335 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 ZNF311Q5JNZ3 666 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 ZNF362Q5T0B9 420 aaPredicted RBP15.69■□□□□ 0.1
CMTM3-213ENST00000566756 SLC35F1Q5T1Q4 408 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 NXNL2Q5VZ03 156 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 TMEM92Q6UXU6 159 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 PIGXQ8TBF5 258 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 TP53INP1Q96A56 240 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 CNRIP1Q96F85 164 aaPredicted RBP15.69■□□□□ 0.1
CMTM3-213ENST00000566756 DIRAS2Q96HU8 199 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 ST6GAL2Q96JF0 529 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 TPK1Q9H3S4 243 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 MRPS30Q9NP92 439 aaKnown RBP15.69■□□□□ 0.1
CMTM3-213ENST00000566756 COLQQ9Y215 455 aaPredicted RBP15.69■□□□□ 0.1
CMTM3-213ENST00000566756 SLC17A4Q9Y2C5 497 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 PRR19A6NJB7 356 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 CHST10O43529 356 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 SERPIND1P05546 499 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 CSF3P09919 207 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 LIMS3P0CW19 117 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 LIMS4P0CW20 117 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 F3P13726 295 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 IGFALSP35858 605 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 OMPP47874 163 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 CACTIN-AS1Q8N1I8 211 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 VWA5B2Q8N398 1253 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 OR8D4Q8NGM9 314 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 ACOT11Q8WXI4 607 aaPredicted RBP15.69■□□□□ 0.1
CMTM3-213ENST00000566756 C1GALT1C1Q96EU7 318 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 OR7D2Q96RA2 312 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 SOSTQ9BQB4 213 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 KLHL31Q9H511 634 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 EGLN3Q9H6Z9 239 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 TIGARQ9NQ88 270 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 LYARQ9NX58 379 aaKnown RBP15.69■□□□□ 0.1
CMTM3-213ENST00000566756 KLHL28Q9NXS3 571 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 EXOGQ9Y2C4 368 aaKnown RBP15.69■□□□□ 0.1
CMTM3-213ENST00000566756 RBMX2Q9Y388 322 aaKnown RBP15.69■□□□□ 0.1
CMTM3-213ENST00000566756 ATG4BQ9Y4P1 393 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 OR1A2Q9Y585 309 aa15.69■□□□□ 0.1
CMTM3-213ENST00000566756 HEATR5BQ9P2D3 2071 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 A0A0G2JN53 185 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 CCDC182A6NF36 153 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 A8MU76 341 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 PPM1DO15297 605 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 ERI3O43414 337 aaKnown RBP15.68■□□□□ 0.1
CMTM3-213ENST00000566756 ERAL1O75616 437 aaKnown RBP15.68■□□□□ 0.1
CMTM3-213ENST00000566756 AIFM1O95831 613 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 NKX2-5P52952 324 aaPredicted RBP15.68■□□□□ 0.1
CMTM3-213ENST00000566756 PRKAG1P54619 331 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 RPS25P62851 125 aaKnown RBP15.68■□□□□ 0.1
CMTM3-213ENST00000566756 MXD1Q05195 221 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 TGM3Q08188 693 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 TDGQ13569 410 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 RIN1Q13671 783 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 DSG2Q14126 1118 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 ZFP69Q49AA0 526 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 CRTC2Q53ET0 693 aaPredicted RBP15.68■□□□□ 0.1
CMTM3-213ENST00000566756 AADACL4Q5VUY2 407 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 WASH2PQ6VEQ5 465 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 PRICKLE2Q7Z3G6 844 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 SLC9A6Q92581 669 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 KLK6Q92876 244 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 DEPDC7Q96QD5 511 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 BTBD1Q9H0C5 482 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 IL20Q9NYY1 176 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 POLHQ9Y253 713 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 CARD8Q9Y2G2 431 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 UNC80Q8N2C7 3258 aa15.68■□□□□ 0.1
CMTM3-213ENST00000566756 PRR23AA6NEV1 266 aa15.67■□□□□ 0.1
CMTM3-213ENST00000566756 CENPXA8MT69 81 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms