RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ENKD1Q9H0I2 346 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SLC25A37Q9NYZ2 338 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 STOX2Q9P2F5 926 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 PCTPQ9UKL6 214 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 RBM7Q9Y580 266 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 PCDHGA6Q9Y5G7 932 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CDH10Q9Y6N8 788 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 A0A087WZ62 844 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CDC123O75794 336 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 SIX3O95343 332 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 ACLYP53396 1101 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 RAG2P55895 527 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 PPP3R1P63098 170 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SLC10A7Q0GE19 358 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 LAPTM4AQ15012 233 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 XKR3Q5GH77 459 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 OR11H7Q8NGC8 314 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 EXOSC8Q96B26 276 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 C3orf49Q96BT1 292 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SENP5Q96HI0 755 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 NSUN5Q96P11 429 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 KCNA7Q96RP8 456 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 MAPKAP1Q9BPZ7 522 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CDT1Q9H211 546 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SPACA1Q9HBV2 294 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 DOCK2Q92608 1830 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZAR1LA6NP61 321 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 IGHA2P01877 340 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 IL6P05231 212 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 UROSP10746 265 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 BPIP17213 487 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 PTGER2P43116 358 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 GNG10P50151 68 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 PITX1P78337 314 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 CRHR2Q13324 411 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CTBP1Q13363 440 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SNTB1Q13884 538 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 RAB33AQ14088 237 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CSHL1Q14406 222 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SOWAHAQ2M3V2 549 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 C12orf73Q69YU5 71 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 BICRALQ6AI39 1079 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 APOBEC3HQ6NTF7 200 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 REC114Q7Z4M0 266 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CEP76Q8TAP6 659 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.76□□□□□ -1.972e-24■■■■■ 59.8
CHD9-218ENST00000566029 C10orf90Q96M02 699 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ADAD1Q96M93 576 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 QRSL1Q9H0R6 528 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 OR51J1Q9H342 316 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 FN3KQ9H479 309 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 COMMD9Q9P000 198 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 GSKIPQ9P0R6 139 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 MRPS33Q9Y291 106 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 COL11A1P12107 1806 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 ARFGEF1Q9Y6D6 1849 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 A0A0U1RQF3 1178 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 M0R129 80 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 M0R233 179 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 FGF16O43320 207 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 LANCL1O43813 399 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 GRAP2O75791 330 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 DGAT1O75907 488 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CDRT1O95170 752 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 PTBP3O95758 552 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 CRKP46108 304 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 RPS16P62249 146 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 TIAL1Q01085 375 aaKnown RBP eCLIP2.76□□□□□ -1.973e-8■■■■■ 28.9
CHD9-218ENST00000566029 DSC1Q08554 894 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 NPRL3Q12980 569 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 NOGQ13253 232 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 NFATC4Q14934 902 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 EXOC3L2Q2M3D2 409 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 FRMPD2BQ6IN97 320 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 NAXDQ8IW45 347 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 LAS2Q8IYD9 372 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 FAM98AQ8NCA5 519 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 HAVCR1Q96D42 359 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ATOH8Q96SQ7 321 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 POLR1EQ9GZS1 481 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 TDRD3Q9H7E2 651 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 TM7SF3Q9NS93 570 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 LTBP4Q8N2S1 1624 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 LOC105369274A0A096LPK9 316 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ONECUT3O60422 494 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 UGT2B7P16662 529 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SLC1A2P43004 574 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 RPS25P62851 125 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 VLDLRP98155 873 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 EXOSC6Q5RKV6 272 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 COL13A1Q5TAT6 717 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 HACD4Q5VWC8 232 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 PLAG1Q6DJT9 500 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 EFCAB12Q6NXP0 572 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CDC42EP5Q6NZY7 148 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 APCDD1Q8J025 514 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 OR4N4Q8N0Y3 316 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 L3MBTL4Q8NA19 623 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 NETO1Q8TDF5 533 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SFT2D1Q8WV19 159 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms