RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TSGA13Q96PP4 275 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 MTERF1Q99551 399 aaKnown RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 C9orf16Q9BUW7 83 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 KIFC1Q9BW19 673 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 ADNPQ9H2P0 1102 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 MEAF6Q9HAF1 191 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 DPP3Q9NY33 737 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 FAF1Q9UNN5 650 aaPredicted RBP3.89□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF510Q9Y2H8 683 aa3.89□□□□□ -1.79
LINC00561-201ENST00000565815 DNAH12Q6ZR08 3092 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 A0A0B4J293 547 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 ZCWPW2A0A1B0GU75 182 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 FEZF1A0PJY2 475 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 SCAMP1O15126 338 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 CACNG3O60359 315 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 SERPINI2O75830 405 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 SRP72O76094 671 aaKnown RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 GPIP06744 558 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 RBP1P09455 135 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 CXCL8P10145 99 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 NR2F1P10589 423 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 GABRG2P18507 467 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 PSME3P61289 254 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 MRPS22P82650 360 aaKnown RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 GBE1Q04446 702 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 ZBTB6Q15916 424 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF829Q3KNS6 432 aaPredicted RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 AMZ1Q400G9 498 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 PPP6R3Q5H9R7 873 aaPredicted RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 KCTD11Q693B1 232 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 C8orf82Q6P1X6 216 aaPredicted RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 EFL1Q7Z2Z2 1120 aaKnown RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 KCNMB4Q86W47 210 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 TMEM219Q86XT9 240 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 SMYD1Q8NB12 490 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF114Q8NC26 417 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 RNF139Q8WU17 664 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 TANKQ92844 425 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 RCN3Q96D15 328 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 VPS39Q96JC1 886 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 CNBD2Q96M20 576 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 RDH12Q96NR8 316 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 AGAP3Q96P47 875 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 LGMNQ99538 433 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 TDRD1Q9BXT4 1180 aaKnown RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 SLA2Q9H6Q3 261 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 COPS7BQ9H9Q2 264 aaPredicted RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 PFDN4Q9NQP4 134 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 GDAP2Q9NXN4 497 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 NKIRAS2Q9NYR9 191 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 DEC1Q9P2X7 70 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 GNPTGQ9UJJ9 305 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 FBXL2Q9UKC9 423 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 AGO1Q9UL18 857 aaKnown RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 PAIP2BQ9ULR5 123 aaKnown RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 SCML1Q9UN30 329 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 ACOT9Q9Y305 439 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 NDUFAF1Q9Y375 327 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 PAM16Q9Y3D7 125 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 LOXL2Q9Y4K0 774 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 DENND4CQ5VZ89 1909 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 LOC100653049A0A140TA62 436 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 A0A1W2PP11 408 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 FAM90A26D6RGX4 464 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF587BE7ETH6 402 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 H0YAE9 185 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 TMX2-CTNND1H3BSU7 103 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 WNT9BO14905 357 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 GRID2O43424 1007 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 SYNCRIPO60506 623 aaKnown RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 KCNJ13O60928 360 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 KRT34O76011 436 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 ANXA9O76027 345 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 PIGNO95427 931 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 NTN1O95631 604 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 NPPAP01160 153 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 PRB1P04280 392 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 HSD17B1P14061 328 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 HMGA1P17096 107 aaKnown RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 XRCC1P18887 633 aaPredicted RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 IL10P22301 178 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 DCKP27707 260 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 DUSP3P51452 185 aaPredicted RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 RAB10P61026 200 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 STX1BP61266 288 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 ATP6V0D1P61421 351 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 RELQ04864 619 aaPredicted RBP3.88□□□□□ -1.79
LINC00561-201ENST00000565815 CEACAM7Q14002 265 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 CDO1Q16878 200 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 LRRC36Q1X8D7 754 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 HLA-BQ31612 363 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 LCN10Q6JVE6 187 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 PMF1Q6P1K2 205 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 FRA10AC1Q70Z53 315 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF567Q8N184 647 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 OR2T34Q8NGX1 318 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 OR2T3Q8NH03 318 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 UBA3Q8TBC4 463 aa3.88□□□□□ -1.79
LINC00561-201ENST00000565815 PTPMT1Q8WUK0 201 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms