RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 DTX1Q86Y01 620 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 AQP12AQ8IXF9 295 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 ANKFN1Q8N957 763 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 NFAM1Q8NET5 270 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-205ENST00000564899 SLC38A5Q8WUX1 472 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 HOXB13Q92826 284 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-205ENST00000564899 KIAA1143Q96AT1 154 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-205ENST00000564899 VMP1Q96GC9 406 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 GAL3ST4Q96RP7 486 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 ZNF700Q9H0M5 742 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 GORASP2Q9H8Y8 452 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 Q9N2J8 555 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 GIN1Q9NXP7 522 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 KCND3Q9UK17 655 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 PPIEQ9UNP9 301 aaKnown RBP10.27□□□□□ -0.77
SF3B3-205ENST00000564899 LIPT1Q9Y234 373 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 PCDHGB3Q9Y5G1 929 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 SDK2Q58EX2 2172 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 IGHV1-45A0A0A0MS14 117 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 TRBV11-1A0A0K0K1C0 115 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 C2orf92A0A1B0GVN3 265 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 GXYLT2A0PJZ3 443 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 CLEC18AA5D8T8 446 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 SOCS6O14544 535 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 ENTPD5O75356 428 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 SOX30O94993 753 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 PGM3O95394 542 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 AK1P00568 194 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 SERPINA1P01009 418 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 C8BP07358 591 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 CHRM4P08173 479 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 KDELR2P33947 212 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 TRHRP34981 398 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-205ENST00000564899 CLCN2P51788 898 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 GPR143P51810 404 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 DCAF7P61962 342 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 POU6F2P78424 691 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-205ENST00000564899 MRPS22P82650 360 aaKnown RBP10.26□□□□□ -0.77
SF3B3-205ENST00000564899 PSG6Q00889 435 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 SSPNQ14714 243 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 MYBPC3Q14896 1274 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 MAPK11Q15759 364 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 NNATQ16517 81 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 DCST2Q5T1A1 773 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 HLA-DQA1Q5Y7H0 255 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 CRYBG3Q68DQ2 2970 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 KIRREL2Q6UWL6 708 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 CLEC18BQ6UXF7 455 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 NPSR1Q6W5P4 371 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 CCDC80Q76M96 950 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 GALNT10Q86SR1 603 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 PATL1Q86TB9 770 aaKnown RBP10.26□□□□□ -0.77
SF3B3-205ENST00000564899 RAB43Q86YS6 212 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 C9orf40Q8IXQ3 194 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 CLEC18CQ8NCF0 446 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 APCDD1LQ8NCL9 501 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 OR11G2Q8NGC1 345 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 BBS10Q8TAM1 723 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 SLC26A7Q8TE54 656 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 PIK3R3Q92569 461 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 STMN2Q93045 179 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 RMND5BQ96G75 393 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-205ENST00000564899 VPS50Q96JG6 964 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 BTBD9Q96Q07 612 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 TRNT1Q96Q11 434 aaKnown RBP10.26□□□□□ -0.77
SF3B3-205ENST00000564899 BTBD2Q9BX70 525 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 WWTR1Q9GZV5 400 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 GPN2Q9H9Y4 310 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-205ENST00000564899 CALML5Q9NZT1 146 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 ZNF223Q9UK11 482 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-205ENST00000564899 OR10H1Q9Y4A9 318 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 ZNF451Q9Y4E5 1061 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 PCDHGA6Q9Y5G7 932 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 MRPS18BQ9Y676 258 aaKnown RBP10.26□□□□□ -0.77
SF3B3-205ENST00000564899 CREBBPQ92793 2442 aa10.26□□□□□ -0.77
SF3B3-205ENST00000564899 CELSR2Q9HCU4 2923 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 NSG1A0A0A6YYJ2 146 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 A0A1W2PQ72 361 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 TCRBV5S2A0A599 114 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 TCRBV3S1A0A5B6 114 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 DHRS12A0PJE2 317 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 FRG2CA6NGY1 282 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 PDE9AO76083 593 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 H6PDO95479 791 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 CT45A8P0DMV1 189 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 CT45A9P0DMV2 189 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 GP1BBP13224 206 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 PPICP45877 212 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 PCBP3P57721 371 aaKnown RBP10.25□□□□□ -0.77
SF3B3-205ENST00000564899 IL10RAQ13651 578 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 EXT1Q16394 746 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 BTBD16Q32M84 506 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 ARHGAP11BQ3KRB8 267 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 CT45A2Q5DJT8 189 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 CRB2Q5IJ48 1285 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 CCNJQ5T5M9 372 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 PRAMEF8Q5VWM4 474 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 PRAMEF7Q5VXH5 474 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 HSDL2Q6YN16 418 aa10.25□□□□□ -0.77
SF3B3-205ENST00000564899 LRRC74BQ6ZQY2 392 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms