RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SORT1Q99523 831 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 TTYH2Q9BSA4 534 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 RUBCNLQ9H714 662 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 TMBIM4Q9HC24 238 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 SERHLQ9NQF3 203 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 NKIRAS1Q9NYS0 192 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 SLC6A5Q9Y345 797 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 PCDHGB3Q9Y5G1 929 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 KCNH1O95259 989 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 LAMP1P11279 417 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 G6PDP11413 515 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 CLK3P49761 638 aaKnown RBP16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 PRR5P85299 388 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 BST1Q10588 318 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 CDSNQ15517 529 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 WDSUB1Q8N9V3 476 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 FAM83FQ8NEG4 500 aaPredicted RBP16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 OR14L1PQ8NHC6 308 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 SLC9A6Q92581 669 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 MS4A4EQ96PG1 132 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 TIMP4Q99727 224 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 AKTIPQ9H8T0 292 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 SDHAF3Q9NRP4 125 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 NTMQ9P121 344 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 RNF6Q9Y252 685 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 ARHGAP21Q5T5U3 1957 aa16.73■□□□□ 0.27
SYNGR3-204ENST00000564642 AHRRA9YTQ3 701 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 IL33O95760 270 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 CHRNB4P30926 498 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 EVI2BP34910 448 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 PTGER4P35408 488 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 SLC18A1P54219 525 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 WDR4P57081 412 aaKnown RBP16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 CRYZQ08257 329 aaKnown RBP16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 CASP8Q14790 479 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 LSM12Q3MHD2 195 aaKnown RBP16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 RTL6Q6ICC9 239 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 ZCCHC12Q6PEW1 402 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 YRDCQ86U90 279 aaKnown RBP16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 PM20D2Q8IYS1 436 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 KRTCAP2Q8N6L1 136 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 ABTB1Q969K4 478 aaPredicted RBP16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 MARVELD3Q96A59 401 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 COQ8BQ96D53 544 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 PNPOQ9NVS9 261 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 ASIC5Q9NY37 505 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 PPP4R1LQ9P1A2 415 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 HAO1Q9UJM8 370 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 FAM215AQ9Y5M1 114 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 SNX8Q9Y5X2 465 aa16.72■□□□□ 0.27
SYNGR3-204ENST00000564642 GXYLT2A0PJZ3 443 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 FAM47E-STBD1D6RA91 191 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 CFLARO15519 480 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 SCO2O43819 266 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 ALOX5P09917 674 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 GLI4P10075 376 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 BMP7P18075 431 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 PRIM2P49643 509 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 CLDN8P56748 225 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 SF3B4Q15427 424 aaKnown RBP eCLIP16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 NHSL2Q5HYW2 709 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 VASNQ6EMK4 673 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 OR5M10Q6IEU7 315 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 CCDC71Q8IV32 467 aaPredicted RBP16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 ULK2Q8IYT8 1036 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 OR4K17Q8NGC6 315 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 LILRB4Q8NHJ6 448 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 RNF138Q8WVD3 245 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 OR5P2Q8WZ92 322 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 PIK3R3Q92569 461 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 TLCD1Q96CP7 247 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 RMND5BQ96G75 393 aaPredicted RBP16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 DUSP26Q9BV47 211 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 NUF2Q9BZD4 464 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 BHLHE41Q9C0J9 482 aaPredicted RBP16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 ZCCHC3Q9NUD5 404 aaKnown RBP16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 THAP1Q9NVV9 213 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 ABCG2Q9UNQ0 655 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 CAMK2AQ9UQM7 478 aa16.71■□□□□ 0.27
SYNGR3-204ENST00000564642 CACNA1DQ01668 2161 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 FADS1O60427 444 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 NKX2-2O95096 273 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 ACTL6AO96019 429 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 COX6B1P14854 86 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 SRD5A2P31213 254 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 MAP3K8P41279 467 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 ZFP36L2P47974 494 aaKnown RBP16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 GAS1P54826 345 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 PGS1Q32NB8 556 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 ATG16L1Q676U5 607 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 TRIM42Q8IWZ5 723 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 RIMKLAQ8IXN7 391 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 NUDT8Q8WV74 236 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 JADE3Q92613 823 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 HOXB13Q92826 284 aaPredicted RBP16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 FAM120BQ96EK7 910 aaKnown RBP16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 GIMAP5Q96F15 307 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 CHMP6Q96FZ7 201 aa16.7■□□□□ 0.26
SYNGR3-204ENST00000564642 YIPF4Q9BSR8 244 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms