RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 RAB21Q9UL25 225 aa18.16■□□□□ 0.5
SHCBP1-203ENST00000564272 GXYLT2A0PJZ3 443 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 WDR91A4D1P6 747 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 HSPB2A8KAH6 182 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 ESPNB1AK53 854 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 CTIFO43310 598 aaKnown RBP18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 LYPLA1O75608 230 aaPredicted RBP18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 ACTL6AO96019 429 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 IFI6P09912 130 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 SRD5A2P31213 254 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 GCKP35557 465 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 FRKP42685 505 aaPredicted RBP18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 ASMTP46597 345 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 KRTAP10-9P60411 292 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 STX5Q13190 355 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 HSPB2Q16082 182 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 DECR1Q16698 335 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 SLC25A35Q3KQZ1 300 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 SZRD1Q7Z422 152 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 IFNEQ86WN2 208 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 NUDCD3Q8IVD9 361 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 HOMEZQ8IX15 550 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 FBXO30Q8TB52 745 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 C14orf79Q96F83 325 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 RTN4RQ9BZR6 473 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 PPP4R1LQ9P1A2 415 aa18.15■□□□□ 0.5
SHCBP1-203ENST00000564272 TMEM114B3SHH9 223 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 SCAMP2O15127 329 aaKnown RBP18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 FADS1O60427 444 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 IL33O95760 270 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 PRPS2P11908 318 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 MAPK1P28482 360 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 CEACAM8P31997 349 aaPredicted RBP18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 GABRA3P34903 492 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 HPCAL1P37235 193 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 PRKAG1P54619 331 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 MANFP55145 182 aaKnown RBP18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 TLE4Q04727 773 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 PTGR1Q14914 329 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 NSUN5P2Q63ZY6 315 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 EXOC3L1Q86VI1 746 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 TRIM42Q8IWZ5 723 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 DMRTC2Q8IXT2 367 aaPredicted RBP18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 RELL2Q8NC24 303 aaPredicted RBP18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 OR7A2PQ8NGA2 310 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 OR4K17Q8NGC6 315 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 PPP1R14CQ8TAE6 165 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 PIK3R3Q92569 461 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 RMND5BQ96G75 393 aaPredicted RBP18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 CENPHQ9H3R5 247 aa18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 ACSS1Q9NUB1 689 aaPredicted RBP18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 RPH3AQ9Y2J0 694 aaPredicted RBP18.14■□□□□ 0.49
SHCBP1-203ENST00000564272 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 ITM2AO43736 263 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 HSPA4LO95757 839 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 IGKV1D-16P01601 117 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 BMP5P22003 454 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 TIMP3P35625 211 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 STARP49675 285 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 GFRA1P56159 465 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 DLX5P56178 289 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 SRYQ05066 204 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 CHI3L2Q15782 390 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 ATP6AP1LQ52LC2 224 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 C6orf136Q5SQH8 315 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 CEP85LQ5SZL2 805 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 NUP43Q8NFH3 380 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 NUDT8Q8WV74 236 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 MTERF3Q96E29 417 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 GIMAP5Q96F15 307 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 SFXN2Q96NB2 322 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 ZIM3Q96PE6 472 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 MS4A4EQ96PG1 132 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 TUBA1CQ9BQE3 449 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 DSN1Q9H410 356 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 ZNF395Q9H8N7 513 aaPredicted RBP18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 FAM120CQ9NX05 1096 aaKnown RBP18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 ATP6V1HQ9UI12 483 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 ABCG2Q9UNQ0 655 aa18.13■□□□□ 0.49
SHCBP1-203ENST00000564272 PDZD2O15018 2839 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 CD8B2A6NJW9 211 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 H0Y3Z8 333 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 UTS2O95399 124 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 ACP2P11117 423 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 LAMP1P11279 417 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 DPP4P27487 766 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 MAP3K8P41279 467 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 LHX2P50458 406 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 ZNF136P52737 540 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 SF3B4Q15427 424 aaKnown RBP eCLIP18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 PLXDC2Q6UX71 529 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 LRIG3Q6UXM1 1119 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 R3HCC1LQ7Z5L2 792 aaKnown RBP18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 GALNT10Q86SR1 603 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 FADS6Q8N9I5 356 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 C9orf106Q8NAJ2 232 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 FNDC5Q8NAU1 212 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 OR2M3Q8NG83 312 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 GPR151Q8TDV0 419 aa18.12■□□□□ 0.49
SHCBP1-203ENST00000564272 SLC9A6Q92581 669 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms