RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ROPN1BQ9BZX4 212 aaPredicted RBP15.63■□□□□ 0.09
CDC42BPB-208ENST00000561271 REEP4Q9H6H4 257 aa15.63■□□□□ 0.09
CDC42BPB-208ENST00000561271 ROPN1Q9HAT0 212 aaPredicted RBP15.63■□□□□ 0.09
CDC42BPB-208ENST00000561271 TAS2R10Q9NYW0 307 aa15.63■□□□□ 0.09
CDC42BPB-208ENST00000561271 PPP4R1LQ9P1A2 415 aa15.63■□□□□ 0.09
CDC42BPB-208ENST00000561271 CBLCQ9ULV8 474 aa15.63■□□□□ 0.09
CDC42BPB-208ENST00000561271 L3MBTL1Q9Y468 752 aa15.63■□□□□ 0.09
CDC42BPB-208ENST00000561271 TRAF6Q9Y4K3 522 aa15.63■□□□□ 0.09
CDC42BPB-208ENST00000561271 H0Y3Z8 333 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 DVL2O14641 736 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 SKAP2O75563 359 aaPredicted RBP15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 TIMP3P35625 211 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 MRPS22P82650 360 aaKnown RBP15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 SRYQ05066 204 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 GAB1Q13480 694 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 PDE7AQ13946 482 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 RCAN2Q14206 197 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 ZNHIT3Q15649 155 aaPredicted RBP15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 DECR1Q16698 335 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 UGT3A2Q3SY77 523 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 CYP27C1Q4G0S4 372 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 SZRD1Q7Z422 152 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 TRIM42Q8IWZ5 723 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 OR4K17Q8NGC6 315 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 ZFP28Q8NHY6 868 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 FBXO30Q8TB52 745 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 ZNF764Q96H86 408 aaPredicted RBP15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 SFXN2Q96NB2 322 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 TUBA1CQ9BQE3 449 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 ZNF559Q9BR84 538 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 EML4Q9HC35 981 aaKnown RBP15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 Q9N2J8 555 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 SH3BP4Q9P0V3 963 aa15.62■□□□□ 0.09
CDC42BPB-208ENST00000561271 GXYLT2A0PJZ3 443 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 MBD3L4A6NDZ8 208 aaPredicted RBP15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 MBD3L3A6NE82 208 aaPredicted RBP15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 MBD3L5A6NJ08 208 aaPredicted RBP15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 CD8B2A6NJW9 211 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 IL2RAP01589 272 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 FGF4P08620 206 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 BCKDHAP12694 445 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 UQCRC1P31930 480 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 STARP49675 285 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 ASCL1P50553 236 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 GFRA1P56159 465 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 SF3B4Q15427 424 aaKnown RBP eCLIP15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 KRT71Q3SY84 523 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 XKR7Q5GH72 579 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 POMZP3Q6PJE2 187 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 ENPP6Q6UWR7 440 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 PLXDC2Q6UX71 529 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 CDH24Q86UP0 819 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 TMEM200AQ86VY9 491 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 C9orf106Q8NAJ2 232 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 MBD3L2Q8NHZ7 208 aaPredicted RBP15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 PIK3R3Q92569 461 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 RMND5BQ96G75 393 aaPredicted RBP15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 PKNOX2Q96KN3 472 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 SH3GL2Q99962 352 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 C1orf50Q9BV19 199 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 RTN4RQ9BZR6 473 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 KCNN3Q9UGI6 736 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 ABCG2Q9UNQ0 655 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 RPH3AQ9Y2J0 694 aaPredicted RBP15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 TMED5Q9Y3A6 229 aa15.61■□□□□ 0.09
CDC42BPB-208ENST00000561271 TYROBPO43914 113 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 FADS1O60427 444 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 TBX19O60806 448 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 IL33O95760 270 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 BPGMP07738 259 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 IFI6P09912 130 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 DPP4P27487 766 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 GABRA3P34903 492 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 HPCAL1P37235 193 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 FRKP42685 505 aaPredicted RBP15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 ASMTP46597 345 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 LHX2P50458 406 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 AGFG1P52594 562 aaKnown RBP15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 ZNF844Q08AG5 666 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 GALNT10Q86SR1 603 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 MREGQ8N565 214 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 FADS6Q8N9I5 356 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 OR2M3Q8NG83 312 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 ZPLD1Q8TCW7 415 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 ZBED6CLQ96FA7 236 aaPredicted RBP15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 C3orf30Q96M34 536 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 MS4A4EQ96PG1 132 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 G6PC3Q9BUM1 346 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 DSN1Q9H410 356 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 FAM120CQ9NX05 1096 aaKnown RBP15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 ITGB1BP2Q9UKP3 347 aa15.6■□□□□ 0.09
CDC42BPB-208ENST00000561271 HIVEP1P15822 2718 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 CLCA1A8K7I4 914 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 SCAMP2O15127 329 aaKnown RBP15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 PEX11AO75192 247 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 IGKV1D-16P01601 117 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 PRPS2P11908 318 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 CPN1P15169 458 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 ETV4P43268 484 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms