RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 FCGR1AP12314 374 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 TCN2P20062 427 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 FASP25445 335 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 GPR143P51810 404 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 CHN2P52757 468 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 KCNJ10P78508 379 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 CT45A2Q5DJT8 189 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 CCNJQ5T5M9 372 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 PAPD4Q6PIY7 484 aaKnown RBP10.41□□□□□ -0.74
USP3-218ENST00000560202 NPSR1Q6W5P4 371 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 ARMC8Q8IUR7 673 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 KBTBD2Q8IY47 623 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 ESX1Q8N693 406 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 TMEM102Q8N9M5 508 aaPredicted RBP10.41□□□□□ -0.74
USP3-218ENST00000560202 SMYD1Q8NB12 490 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 NFAM1Q8NET5 270 aaPredicted RBP10.41□□□□□ -0.74
USP3-218ENST00000560202 CT55Q8WUE5 264 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 ADAMTS14Q8WXS8 1223 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 C8orf44Q96CB5 159 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 LPAR4Q99677 370 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 WDR77Q9BQA1 342 aaPredicted RBP10.41□□□□□ -0.74
USP3-218ENST00000560202 SPATA5L1Q9BVQ7 753 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 KLHL4Q9C0H6 718 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 ZNF350Q9GZX5 532 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 POLR1BQ9H9Y6 1135 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 Q9N2J8 555 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 SEC14L3Q9UDX4 400 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 MKLN1Q9UL63 735 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 GPR55Q9Y2T6 319 aaPredicted RBP10.41□□□□□ -0.74
USP3-218ENST00000560202 WDR45Q9Y484 360 aa10.41□□□□□ -0.74
USP3-218ENST00000560202 KIF26BQ2KJY2 2108 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 OR6C76A6NM76 312 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 STX11O75558 287 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 KCNK2O95069 426 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 ZIC2O95409 532 aaPredicted RBP10.4□□□□□ -0.74
USP3-218ENST00000560202 CD247P20963 164 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 TRHRP34981 398 aaPredicted RBP10.4□□□□□ -0.74
USP3-218ENST00000560202 FOLR3P41439 243 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 PPICP45877 212 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 GABREP78334 506 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 DUSP7Q16829 419 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 IFI44LQ53G44 452 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 TYW3Q6IPR3 259 aaKnown RBP10.4□□□□□ -0.74
USP3-218ENST00000560202 HMBOX1Q6NT76 420 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 FIGNL1Q6PIW4 674 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 FRRS1Q6ZNA5 592 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 AMIGO2Q86SJ2 522 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 NLGN4XQ8N0W4 816 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 CATSPER1Q8NEC5 780 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 B3GNT7Q8NFL0 401 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 NLGN4YQ8NFZ3 816 aaPredicted RBP10.4□□□□□ -0.74
USP3-218ENST00000560202 OR4N2Q8NGD1 307 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 RASSF5Q8WWW0 418 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 ZG16BQ96DA0 208 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 RMND5BQ96G75 393 aaPredicted RBP10.4□□□□□ -0.74
USP3-218ENST00000560202 RSPO3Q9BXY4 272 aaPredicted RBP10.4□□□□□ -0.74
USP3-218ENST00000560202 SEMA6AQ9H2E6 1030 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 MTHFD2LQ9H903 347 aaPredicted RBP10.4□□□□□ -0.74
USP3-218ENST00000560202 IL1RAPQ9NPH3 570 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 AGPAT4Q9NRZ5 378 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 FBXO34Q9NWN3 711 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 CDV3Q9UKY7 258 aaKnown RBP10.4□□□□□ -0.74
USP3-218ENST00000560202 BAG5Q9UL15 447 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 PPIEQ9UNP9 301 aaKnown RBP10.4□□□□□ -0.74
USP3-218ENST00000560202 PADI2Q9Y2J8 665 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 OR10H1Q9Y4A9 318 aa10.4□□□□□ -0.74
USP3-218ENST00000560202 WDFY3Q8IZQ1 3526 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 LOC102723996A0A087X1L8 192 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 C2orf92A0A1B0GVN3 265 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 PCDH17O14917 1159 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 CASQ2O14958 399 aaPredicted RBP10.39□□□□□ -0.75
USP3-218ENST00000560202 DENRO43583 198 aaKnown RBP10.39□□□□□ -0.75
USP3-218ENST00000560202 SEC24DO94855 1032 aaPredicted RBP10.39□□□□□ -0.75
USP3-218ENST00000560202 ALPPP05187 535 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 DRD5P21918 477 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 MAGEA2P43356 314 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 KCNJ5P48544 419 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 HSPA13P48723 471 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 DCAF7P61962 342 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 DCTN2Q13561 401 aaKnown RBP10.39□□□□□ -0.75
USP3-218ENST00000560202 EBPQ15125 230 aaKnown RBP10.39□□□□□ -0.75
USP3-218ENST00000560202 TRIP10Q15642 601 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 ATP6AP1Q15904 470 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 NNATQ16517 81 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 CYP27C1Q4G0S4 372 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 SLC29A4Q7RTT9 530 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 TMPRSS7Q7RTY8 843 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 HMGN2P46Q86SG4 172 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 ZNF554Q86TJ5 538 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 ZDHHC21Q8IVQ6 265 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 C9orf40Q8IXQ3 194 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 AMER2Q8N7J2 671 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 ZSCAN1Q8NBB4 408 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 APCDD1LQ8NCL9 501 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 GPR32P1Q8NGA4 272 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 SPPL2AQ8TCT8 520 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 ADIPOR1Q96A54 375 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 GAL3ST4Q96RP7 486 aa10.39□□□□□ -0.75
USP3-218ENST00000560202 MRPS26Q9BYN8 205 aaKnown RBP10.39□□□□□ -0.75
USP3-218ENST00000560202 SEMA4CQ9C0C4 833 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms