RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 OR4F3Q6IEY1 312 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 MFSD12Q6NUT3 480 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 FIGNL1Q6PIW4 674 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 RPTNQ6XPR3 784 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 WDR75Q8IWA0 830 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 SLC16A11Q8NCK7 471 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 FAM83FQ8NEG4 500 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 OR5AK3PQ8NH89 298 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 NEIL3Q8TAT5 605 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 OR5P2Q8WZ92 322 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 JADE3Q92613 823 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 SARAFQ96BY9 339 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 COQ8BQ96D53 544 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 ATP6V1G3Q96LB4 118 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 MS4A4EQ96PG1 132 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 DUSP26Q9BV47 211 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 MEAF6Q9HAF1 191 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 C3orf14Q9HBI5 128 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 THAP1Q9NVV9 213 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 FBXO34Q9NWN3 711 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 QPCTLQ9NXS2 382 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 ASIC5Q9NY37 505 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 FAM215AQ9Y5M1 114 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 WIF1Q9Y5W5 379 aa13.53□□□□□ -0.24
RABGGTA-211ENST00000559850 MED12Q93074 2177 aa13.52□□□□□ -0.24
RABGGTA-211ENST00000559850 OR14I1A6ND48 311 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 C9JVG2 144 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 CFLARO15519 480 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 GMFGO60234 142 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 ABCB7O75027 752 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 SNUPNO95149 360 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 IL33O95760 270 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 IFI6P09912 130 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 ALDOCP09972 364 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 LBPP18428 481 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 ACVR2AP27037 513 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 EPHA3P29320 983 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 EVI2BP34910 448 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 SOAT1P35610 550 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 MAP3K8P41279 467 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 SMSP52788 366 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 GAS1P54826 345 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 WNT3P56703 355 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 MRPS22P82650 360 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 OCRLQ01968 901 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 PMPCAQ10713 525 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 SNTA1Q13424 505 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 TP53BP2Q13625 1128 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 LASP1Q14847 261 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 MLC1Q15049 377 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 DECR1Q16698 335 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 SPDYE7PQ495Y7 208 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 CYP27C1Q4G0S4 372 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 CCNJQ5T5M9 372 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 WLSQ5T9L3 541 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 ATG16L1Q676U5 607 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 TMEM81Q6P7N7 255 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 MAVSQ7Z434 540 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 ZAR1Q86SH2 424 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 MARCH3Q86UD3 253 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 ANKRD46Q86W74 232 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 CCDC71Q8IV32 467 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 CEP70Q8NHQ1 597 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 PHF10Q8WUB8 498 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 HOXB13Q92826 284 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 SDCCAG3Q96C92 435 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 CHMP6Q96FZ7 201 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 MARK4Q96L34 752 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 DPY30Q9C005 99 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 BHLHE41Q9C0J9 482 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 ATAD3AQ9NVI7 634 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 NTMQ9P121 344 aa13.52□□□□□ -0.25
RABGGTA-211ENST00000559850 C19orf84I3L1E1 186 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 FADS1O60427 444 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 NKX2-2O95096 273 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 UTS2O95399 124 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 HMGN2P05204 90 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 ALOX5P09917 674 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 DDX5P17844 614 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 BMP7P18075 431 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 ELAVL4P26378 380 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 CCT3P49368 545 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 RNF144AP50876 292 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 HBA1P69905 142 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 PHC1P78364 1004 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 CRYZQ08257 329 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 SMU1Q2TAY7 513 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 GRAMD1BQ3KR37 738 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 C1orf185Q5T7R7 199 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 HDXQ7Z353 690 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 PLCZ1Q86YW0 608 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 CDRT4Q8N9R6 151 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 OR14L1PQ8NHC6 308 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 RNF138Q8WVD3 245 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 ZNF75CPQ92670 426 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 CDS1Q92903 461 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 TEX37Q96LM6 180 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 PRPF18Q99633 342 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 UGT2B28Q9BY64 529 aa13.51□□□□□ -0.25
RABGGTA-211ENST00000559850 PPP4R1LQ9P1A2 415 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms