RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CHI3L2Q15782 390 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 PDCD2Q16342 344 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-208ENST00000558827 IKBIPQ70UQ0 350 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 MARCH3Q86UD3 253 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 OR2L13Q8N349 312 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 KRTCAP2Q8N6L1 136 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 GATSQ8NAP1 163 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 NUP43Q8NFH3 380 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 OR4K17Q8NGC6 315 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 GPR151Q8TDV0 419 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 SLC9A6Q92581 669 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 ERP27Q96DN0 273 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 CHMP6Q96FZ7 201 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 FCRL1Q96LA6 429 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 ZIM3Q96PE6 472 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 CCT7Q99832 543 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 PAIP2Q9BPZ3 127 aaKnown RBP11.38□□□□□ -0.59
SMAD3-208ENST00000558827 SPOCK3Q9BQ16 436 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 TUBA1CQ9BQE3 449 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 STMN4Q9H169 189 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-208ENST00000558827 PPP4R1LQ9P1A2 415 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 WIF1Q9Y5W5 379 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 AHRRA9YTQ3 701 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 SHISA8B8ZZ34 492 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 H0Y3Z8 333 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 PLOD2O00469 737 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 HSPA4LO95757 839 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 EPPINO95925 133 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 ACP2P11117 423 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 LAMP1P11279 417 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 PRPS2P11908 318 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 DPP4P27487 766 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 MSX1P28360 303 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 EVI2BP34910 448 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 ETV4P43268 484 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 GAS1P54826 345 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 MYBPHQ13203 477 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 SNTA1Q13424 505 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 MPP2Q14168 576 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 PTGR1Q14914 329 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 ZNHIT3Q15649 155 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-208ENST00000558827 DECR1Q16698 335 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 C6orf136Q5SQH8 315 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 RIPPLY2Q5TAB7 128 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 IL23RQ5VWK5 629 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 FIGNL1Q6PIW4 674 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 ZAR1Q86SH2 424 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 UBQLNLQ8IYU4 475 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 C9orf106Q8NAJ2 232 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 RELL2Q8NC24 303 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-208ENST00000558827 DUSP19Q8WTR2 217 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 JADE3Q92613 823 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 TUBGCP3Q96CW5 907 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 DOCK7Q96N67 2140 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 SFXN2Q96NB2 322 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 TMEM109Q9BVC6 243 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 OR2B2Q9GZK3 357 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 Q9N2J8 555 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 FBXO34Q9NWN3 711 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 WBP11Q9Y2W2 641 aaKnown RBP11.37□□□□□ -0.59
SMAD3-208ENST00000558827 SNX8Q9Y5X2 465 aa11.37□□□□□ -0.59
SMAD3-208ENST00000558827 TEP1Q99973 2627 aaKnown RBP11.37□□□□□ -0.59
SMAD3-208ENST00000558827 NPIPB8E9PQR5 432 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 FADS1O60427 444 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 ZIC3O60481 467 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 ABCB7O75027 752 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 UTS2O95399 124 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 PSMG1O95456 288 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 IL2RAP01589 272 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 HOXD4P09016 255 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-208ENST00000558827 HK1P19367 917 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 BGNP21810 368 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 SSTR2P30874 369 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 ZNF136P52737 540 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 DGKQP52824 942 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 MRPS22P82650 360 aaKnown RBP11.36□□□□□ -0.59
SMAD3-208ENST00000558827 FOXF2Q12947 444 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 GRAMD1BQ3KR37 738 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 CYP27C1Q4G0S4 372 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 ATP6AP1LQ52LC2 224 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 CCNJQ5T5M9 372 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 TMEM81Q6P7N7 255 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 APOOLQ6UXV4 268 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 IFNEQ86WN2 208 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 DMRTC2Q8IXT2 367 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-208ENST00000558827 ZZZ3Q8IYH5 903 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 PM20D2Q8IYS1 436 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 MREGQ8N565 214 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 ZNF781Q8N8C0 355 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 ANKRD42Q8N9B4 389 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 FNDC5Q8NAU1 212 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 OR2M3Q8NG83 312 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 ZFP28Q8NHY6 868 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 SMPDL3BQ92485 455 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 NRGNQ92686 78 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 ZBED6CLQ96FA7 236 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-208ENST00000558827 PPP3R2Q96LZ3 170 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 LMF2Q9BU23 707 aaKnown RBP11.36□□□□□ -0.59
SMAD3-208ENST00000558827 C20orf27Q9GZN8 174 aa11.36□□□□□ -0.59
SMAD3-208ENST00000558827 PRDM14Q9GZV8 571 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms