RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 MBD3L3A6NE82 208 aaPredicted RBP10.82□□□□□ -0.68
HERC1-202ENST00000558324 MBD3L5A6NJ08 208 aaPredicted RBP10.82□□□□□ -0.68
HERC1-202ENST00000558324 CD8B2A6NJW9 211 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 B4DXG7 233 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 LSM1O15116 133 aaKnown RBP10.82□□□□□ -0.68
HERC1-202ENST00000558324 GMFGO60234 142 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 NPHS1O60500 1241 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 SKAP2O75563 359 aaPredicted RBP10.82□□□□□ -0.68
HERC1-202ENST00000558324 PSMG1O95456 288 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 CREB1P16220 341 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 CAPN3P20807 821 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 GABRA3P34903 492 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 PRKAG1P54619 331 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 GAS1P54826 345 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 GFRA1P56159 465 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 CYP27C1Q4G0S4 372 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 CES4AQ5XG92 561 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 EMBQ6PCB8 327 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 AAGABQ6PD74 315 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 GALNT10Q86SR1 603 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 UBQLNLQ8IYU4 475 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 ZFP28Q8NHY6 868 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 MBD3L2Q8NHZ7 208 aaPredicted RBP10.82□□□□□ -0.68
HERC1-202ENST00000558324 PIK3R3Q92569 461 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 NRGNQ92686 78 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 ZBTB9Q96C00 473 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 RMND5BQ96G75 393 aaPredicted RBP10.82□□□□□ -0.68
HERC1-202ENST00000558324 METTL2AQ96IZ6 378 aaKnown RBP10.82□□□□□ -0.68
HERC1-202ENST00000558324 FCRL1Q96LA6 429 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 SH3GL2Q99962 352 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 DSN1Q9H410 356 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 REEP4Q9H6H4 257 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 EML4Q9HC35 981 aaKnown RBP10.82□□□□□ -0.68
HERC1-202ENST00000558324 TRAF6Q9Y4K3 522 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 KIAA1549Q9HCM3 1950 aa10.82□□□□□ -0.68
HERC1-202ENST00000558324 DCHS2Q6V1P9 2916 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 CLCA1A8K7I4 914 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 NPIPB8E9PQR5 432 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 PEX11AO75192 247 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 SLU7O95391 586 aaKnown RBP10.81□□□□□ -0.68
HERC1-202ENST00000558324 TMIGD3P0DMS9 266 aaPredicted RBP10.81□□□□□ -0.68
HERC1-202ENST00000558324 BCKDHAP12694 445 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 CPN1P15169 458 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 ARRB2P32121 409 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 KIR2DL3P43628 341 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 LHX2P50458 406 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 MANFP55145 182 aaKnown RBP10.81□□□□□ -0.68
HERC1-202ENST00000558324 FOXF2Q12947 444 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 RAET1LQ5VY80 246 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 POMZP3Q6PJE2 187 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 MARCH3Q86UD3 253 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 EXOC3L1Q86VI1 746 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 GCNT2Q8N0V5 402 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 OR2M3Q8NG83 312 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 OR5M1Q8NGP8 315 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 ZPLD1Q8TCW7 415 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 GPR151Q8TDV0 419 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 RNF138Q8WVD3 245 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 SLC9A6Q92581 669 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 RNASE6Q93091 150 aaKnown RBP10.81□□□□□ -0.68
HERC1-202ENST00000558324 DTNBP1Q96EV8 351 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 ZBED6CLQ96FA7 236 aaPredicted RBP10.81□□□□□ -0.68
HERC1-202ENST00000558324 LRRC46Q96FV0 321 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 OTUB1Q96FW1 271 aaPredicted RBP10.81□□□□□ -0.68
HERC1-202ENST00000558324 LMF2Q9BU23 707 aaKnown RBP10.81□□□□□ -0.68
HERC1-202ENST00000558324 C1orf50Q9BV19 199 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 RTN4RQ9BZR6 473 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 ROPN1BQ9BZX4 212 aaPredicted RBP10.81□□□□□ -0.68
HERC1-202ENST00000558324 CALHM2Q9HA72 323 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 ROPN1Q9HAT0 212 aaPredicted RBP10.81□□□□□ -0.68
HERC1-202ENST00000558324 SLC24A3Q9HC58 644 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 FAM120CQ9NX05 1096 aaKnown RBP10.81□□□□□ -0.68
HERC1-202ENST00000558324 CRIM1Q9NZV1 1036 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 MED11Q9P086 117 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 ZNF629Q9UEG4 869 aaPredicted RBP10.81□□□□□ -0.68
HERC1-202ENST00000558324 PDZD2O15018 2839 aa10.81□□□□□ -0.68
HERC1-202ENST00000558324 ARHGAP21Q5T5U3 1957 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 SYT5O00445 386 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 FADS1O60427 444 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 ZIC3O60481 467 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 KCNH1O95259 989 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 UTS2O95399 124 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 IL33O95760 270 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 IGKV1D-16P01601 117 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 FGF4P08620 206 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 FREM3P0C091 2139 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 PRPS2P11908 318 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 HK1P19367 917 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 CTSSP25774 331 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 HPCAL1P37235 193 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 CLK3P49761 638 aaKnown RBP10.8□□□□□ -0.68
HERC1-202ENST00000558324 PSMD4P55036 377 aaKnown RBP10.8□□□□□ -0.68
HERC1-202ENST00000558324 CLDN18P56856 261 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 PDE7AQ13946 482 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 UGT3A2Q3SY77 523 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 KRT71Q3SY84 523 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 RNF165Q6ZSG1 346 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 GRAMD2AQ8IUY3 354 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 FADS6Q8N9I5 356 aa10.8□□□□□ -0.68
HERC1-202ENST00000558324 NUP43Q8NFH3 380 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms