RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 LILRB1Q8NHL6 650 aaPredicted RBP16.43■□□□□ 0.22
ABCD4-228ENST00000557588 FBXW5Q969U6 566 aa16.43■□□□□ 0.22
ABCD4-228ENST00000557588 EFHD2Q96C19 240 aaPredicted RBP16.43■□□□□ 0.22
ABCD4-228ENST00000557588 TM4SF18Q96CE8 201 aa16.43■□□□□ 0.22
ABCD4-228ENST00000557588 GMPPAQ96IJ6 420 aaPredicted RBP16.43■□□□□ 0.22
ABCD4-228ENST00000557588 NOL11Q9H8H0 719 aaKnown RBP16.43■□□□□ 0.22
ABCD4-228ENST00000557588 ANKRA2Q9H9E1 313 aa16.43■□□□□ 0.22
ABCD4-228ENST00000557588 FANCFQ9NPI8 374 aa16.43■□□□□ 0.22
ABCD4-228ENST00000557588 ABCG2Q9UNQ0 655 aa16.43■□□□□ 0.22
ABCD4-228ENST00000557588 ZNF780BQ9Y6R6 833 aa16.43■□□□□ 0.22
ABCD4-228ENST00000557588 SCO2O43819 266 aa16.42■□□□□ 0.22
ABCD4-228ENST00000557588 TCP1P17987 556 aaKnown RBP16.42■□□□□ 0.22
ABCD4-228ENST00000557588 PSMB1P20618 241 aaKnown RBP16.42■□□□□ 0.22
ABCD4-228ENST00000557588 TRAF3Q13114 568 aa16.42■□□□□ 0.22
ABCD4-228ENST00000557588 FAM83EQ2M2I3 478 aa16.42■□□□□ 0.22
ABCD4-228ENST00000557588 GGNQ86UU5 652 aa16.42■□□□□ 0.22
ABCD4-228ENST00000557588 OR5M1Q8NGP8 315 aa16.42■□□□□ 0.22
ABCD4-228ENST00000557588 RAB3IL1Q8TBN0 382 aa16.42■□□□□ 0.22
ABCD4-228ENST00000557588 NTMT1Q9BV86 223 aa16.42■□□□□ 0.22
ABCD4-228ENST00000557588 FAIM2Q9BWQ8 316 aa16.42■□□□□ 0.22
ABCD4-228ENST00000557588 GPR52Q9Y2T5 361 aa16.42■□□□□ 0.22
ABCD4-228ENST00000557588 RNF115Q9Y4L5 304 aa16.42■□□□□ 0.22
ABCD4-228ENST00000557588 MAGED1Q9Y5V3 778 aaPredicted RBP16.42■□□□□ 0.22
ABCD4-228ENST00000557588 AP4B1Q9Y6B7 739 aa16.42■□□□□ 0.22
ABCD4-228ENST00000557588 UQCRHLA0A096LP55 91 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 EIF3HO15372 352 aaKnown RBP eCLIP16.41■□□□□ 0.22
ABCD4-228ENST00000557588 NME6O75414 186 aaPredicted RBP16.41■□□□□ 0.22
ABCD4-228ENST00000557588 IGHV4-39P01824 125 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 GSTA2P09210 222 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 ARL1P40616 181 aaPredicted RBP16.41■□□□□ 0.22
ABCD4-228ENST00000557588 SLC6A8P48029 635 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 IFT88Q13099 833 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 ACAP2Q15057 778 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 ERCC6LQ2NKX8 1250 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 GLYR1Q49A26 553 aaPredicted RBP16.41■□□□□ 0.22
ABCD4-228ENST00000557588 GGTA1PQ4G0N0 100 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 C6orf52Q5T4I8 152 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 C3orf62Q6ZUJ4 267 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 GTPBP3Q969Y2 492 aaKnown RBP16.41■□□□□ 0.22
ABCD4-228ENST00000557588 C1GALT1C1Q96EU7 318 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 PTGES2Q9H7Z7 377 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 FOLH1BQ9HBA9 442 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 LRTM1Q9HBL6 345 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 CDC42EP3Q9UKI2 254 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 UTS2RQ9UKP6 389 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 SNX24Q9Y343 169 aa16.41■□□□□ 0.22
ABCD4-228ENST00000557588 FADS1O60427 444 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 ADAM11O75078 769 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 PLGP00747 810 aaPredicted RBP16.4■□□□□ 0.22
ABCD4-228ENST00000557588 CDKN1AP38936 164 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 ALDH9A1P49189 494 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 CCNG1P51959 295 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 CTBP2P56545 445 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 TRA2BP62995 288 aaKnown RBP16.4■□□□□ 0.22
ABCD4-228ENST00000557588 SGCBQ16585 318 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.4■□□□□ 0.22
ABCD4-228ENST00000557588 TMEM44Q2T9K0 475 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 KRTAP24-1Q3LI83 254 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 TTC19Q6DKK2 380 aaPredicted RBP16.4■□□□□ 0.22
ABCD4-228ENST00000557588 BEND4Q6ZU67 534 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 PPM1NQ8N819 430 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 OR4N2Q8NGD1 307 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 OR9A2Q8NGT5 310 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 TACO1Q9BSH4 297 aaKnown RBP16.4■□□□□ 0.22
ABCD4-228ENST00000557588 ELOVL6Q9H5J4 265 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 SDHAF3Q9NRP4 125 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 MED11Q9P086 117 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 CPSF2Q9P2I0 782 aaKnown RBP16.4■□□□□ 0.22
ABCD4-228ENST00000557588 CLEC4AQ9UMR7 237 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 SLC12A4Q9UP95 1085 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 LIPT1Q9Y234 373 aa16.4■□□□□ 0.22
ABCD4-228ENST00000557588 CTAGE8P0CG41 777 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 STX5Q13190 355 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 NAB1Q13506 487 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 DNAJC14Q6Y2X3 702 aaPredicted RBP16.39■□□□□ 0.21
ABCD4-228ENST00000557588 STK32CQ86UX6 486 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 SLC44A2Q8IWA5 706 aaPredicted RBP16.39■□□□□ 0.21
ABCD4-228ENST00000557588 CTAGE4Q8IX94 777 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 PTGR2Q8N8N7 351 aaPredicted RBP16.39■□□□□ 0.21
ABCD4-228ENST00000557588 UHMK1Q8TAS1 419 aaKnown RBP16.39■□□□□ 0.21
ABCD4-228ENST00000557588 SMAP2Q8WU79 429 aaPredicted RBP16.39■□□□□ 0.21
ABCD4-228ENST00000557588 KAT2AQ92830 837 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 ATP6V1E2Q96A05 226 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 GPR78Q96P69 363 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 RTN4RQ9BZR6 473 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 BARX1Q9HBU1 254 aaPredicted RBP16.39■□□□□ 0.21
ABCD4-228ENST00000557588 FAM120CQ9NX05 1096 aaKnown RBP16.39■□□□□ 0.21
ABCD4-228ENST00000557588 PCTPQ9UKL6 214 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 OR10H1Q9Y4A9 318 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 SVEP1Q4LDE5 3571 aa16.39■□□□□ 0.21
ABCD4-228ENST00000557588 PCNX3Q9H6A9 2034 aa16.38■□□□□ 0.21
ABCD4-228ENST00000557588 A0A096LNT2 108 aa16.38■□□□□ 0.21
ABCD4-228ENST00000557588 PLOD3O60568 738 aa16.38■□□□□ 0.21
ABCD4-228ENST00000557588 C2P06681 752 aa16.38■□□□□ 0.21
ABCD4-228ENST00000557588 EIF1AXP47813 144 aaKnown RBP16.38■□□□□ 0.21
ABCD4-228ENST00000557588 PSG6Q00889 435 aa16.38■□□□□ 0.21
ABCD4-228ENST00000557588 CTU2Q2VPK5 515 aaKnown RBP16.38■□□□□ 0.21
ABCD4-228ENST00000557588 ZNF672Q499Z4 452 aaPredicted RBP16.38■□□□□ 0.21
ABCD4-228ENST00000557588 NCMAPQ5T1S8 102 aa16.38■□□□□ 0.21
ABCD4-228ENST00000557588 CCDC116Q8IYX3 515 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms