RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 NPSR1Q6W5P4 371 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 CREG2Q8IUH2 290 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 CCDC116Q8IYX3 515 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 FADS6Q8N9I5 356 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 OR4N2Q8NGD1 307 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 OR9A2Q8NGT5 310 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 KAT2AQ92830 837 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 TM4SF18Q96CE8 201 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 VSTM2LQ96N03 204 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 ACTR6Q9GZN1 396 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 STMN4Q9H169 189 aaPredicted RBP8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 PFDN4Q9NQP4 134 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 PLSCR4Q9NRQ2 329 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 FARSBQ9NSD9 589 aaKnown RBP8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 FLRT3Q9NZU0 649 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 MED11Q9P086 117 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 CPSF2Q9P2I0 782 aaKnown RBP8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 UTS2RQ9UKP6 389 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 PSME2Q9UL46 239 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 CLEC4AQ9UMR7 237 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 SLC12A4Q9UP95 1085 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 ZNF780BQ9Y6R6 833 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 PCNX3Q9H6A9 2034 aa8.1□□□□□ -1.11
HNRNPC-227ENST00000556897 OR2M5A3KFT3 312 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 LINC01387J3KSC0 135 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 OVOL3O00110 214 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 PHF1O43189 567 aaPredicted RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 BCAS2O75934 225 aaPredicted RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 ESRRBO95718 433 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 PLGP00747 810 aaPredicted RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 ALDOAP04075 364 aaKnown RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 SOD3P08294 240 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 CTAGE8P0CG41 777 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 FCGR2AP12318 317 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 IDUAP35475 653 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 ACVR1BP36896 505 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 CDKN1AP38936 164 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 SLC6A8P48029 635 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 CCNG1P51959 295 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 PNLIPRP2P54317 469 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 RPS3AP61247 264 aaKnown RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 OCRLQ01968 901 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 IFT88Q13099 833 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 TRAF3Q13114 568 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 ACAP2Q15057 778 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 ETFDHQ16134 617 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 CHRFAM7AQ494W8 412 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 MROH9Q5TGP6 573 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 FAM219BQ5XKK7 198 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 METTL2BQ6P1Q9 378 aaKnown RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 KLC3Q6P597 504 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 SLC44A2Q8IWA5 706 aaPredicted RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 CTAGE4Q8IX94 777 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 METTL25Q8N6Q8 603 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 PTGR2Q8N8N7 351 aaPredicted RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 OR6K3Q8NGY3 331 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 RAB3IL1Q8TBN0 382 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 ZNF675Q8TD23 568 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 GFM2Q969S9 779 aaKnown RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 GTPBP3Q969Y2 492 aaKnown RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 TRMT61AQ96FX7 289 aaKnown RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 NSUN5Q96P11 429 aaKnown RBP8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 GPR78Q96P69 363 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 NTMT1Q9BV86 223 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 FAIM2Q9BWQ8 316 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 RTN4RQ9BZR6 473 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 DPH5Q9H2P9 285 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 ELOVL6Q9H5J4 265 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 ZBTB26Q9HCK0 441 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 EMC9Q9Y3B6 208 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 OR10H1Q9Y4A9 318 aa8.09□□□□□ -1.11
HNRNPC-227ENST00000556897 SVEP1Q4LDE5 3571 aa8.09□□□□□ -1.12
HNRNPC-227ENST00000556897 A0A096LPK6 155 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 CCDC189A1A4V9 331 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 HMX2A2RU54 273 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 A8MV72 311 aaPredicted RBP8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 SHISA8B8ZZ34 492 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 CCDC188H7C350 402 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 EIF3HO15372 352 aaKnown RBP eCLIP8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 CLOCKO15516 846 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 GMFGO60234 142 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 ADAM11O75078 769 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 KLHL2O95198 593 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 F12P00748 615 aaPredicted RBP8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 PDYNP01213 254 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 GSTA2P09210 222 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 EIF1AXP47813 144 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 CTBP2P56545 445 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 PSPHP78330 225 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 MRPS22P82650 360 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 PSG6Q00889 435 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 ZNF844Q08AG5 666 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 CALCOCO2Q13137 446 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 GANABQ14697 944 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 ERCC6LQ2NKX8 1250 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 CTU2Q2VPK5 515 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 SH2D4BQ5SQS7 431 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 CCDC91Q7Z6B0 441 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 MILR1Q7Z6M3 343 aa8.08□□□□□ -1.12
HNRNPC-227ENST00000556897 GGNQ86UU5 652 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms