RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 LRRC40Q9H9A6 602 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 MED4Q9NPJ6 270 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 RSPH14Q9UHP6 348 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 RABL2BQ9UNT1 228 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 SMC3Q9UQE7 1217 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 FBXO7Q9Y3I1 522 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 GRIN2DO15399 1336 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 CCDC88BA6NC98 1476 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 MAP3K1Q13233 1512 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 ERICH3Q5RHP9 1530 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 KIF21BO75037 1637 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 PPIAL4CA0A0B4J2A2 164 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 ARHGEF33A8MVX0 844 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 C11orf98E9PRG8 122 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 PPIAL4DF5H284 164 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 IMPA2O14732 288 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 ARHGEF9O43307 516 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 IDH3BO43837 385 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 MAPKBP1O60336 1514 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 SPAG6O75602 509 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 PALMO75781 387 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 ADCY5O95622 1261 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 CHRNA1P02708 482 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 SNRPCP09234 159 aaKnown RBP3.57□□□□□ -1.84
PRPF39-210ENST00000556718 PPIAL4GP0DN37 164 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 PDHBP11177 359 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 ANXA3P12429 323 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 OXTRP30559 389 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 SPRP35270 261 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-210ENST00000556718 VCPP55072 806 aaKnown RBP3.57□□□□□ -1.84
PRPF39-210ENST00000556718 RIPK1Q13546 671 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 NECTIN1Q15223 517 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 CDKN3Q16667 212 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 CCDC152Q4G0S7 254 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 CYBRD1Q53TN4 286 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 CENPPQ6IPU0 288 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 PRR5LQ6MZQ0 368 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 CEACAM19Q7Z692 300 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 NBPF5PQ86XG9 351 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-210ENST00000556718 AQP11Q8NBQ7 271 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 OR4F17Q8NGA8 305 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 C11orf45Q8TAV5 145 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 NPRL2Q8WTW4 380 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 PIBF1Q8WXW3 757 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 ANKRD7Q92527 254 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 SHC3Q92529 594 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 RAD50Q92878 1312 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 OR4F4Q96R69 305 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 ATF6BQ99941 703 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 ZSCAN5AQ9BUG6 496 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 FGFBP2Q9BYJ0 223 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 GORASP2Q9H8Y8 452 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 IL1RL2Q9HB29 575 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.57□□□□□ -1.84
PRPF39-210ENST00000556718 ZDHHC18Q9NUE0 388 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 MBD2Q9UBB5 411 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 RNF14Q9UBS8 474 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 HPCAL4Q9UM19 191 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 RRP15Q9Y3B9 282 aaKnown RBP3.57□□□□□ -1.84
PRPF39-210ENST00000556718 KLF2Q9Y5W3 355 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-210ENST00000556718 CPQQ9Y646 472 aa3.57□□□□□ -1.84
PRPF39-210ENST00000556718 PLEKHH2Q8IVE3 1493 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 ANKRD30AQ9BXX3 1397 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 A0A087X002 238 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 MBLAC1A4D2B0 266 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 MFSD2BA6NFX1 497 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 H0YHG0 523 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 PDLIM1O00151 329 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 PES1O00541 588 aaKnown RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 CASKO14936 926 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 BCAS1O75363 584 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 ZNF821O75541 412 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 ZFAND5O76080 213 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 UFL1O94874 794 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 SORBS2O94875 1100 aaKnown RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 TOXO94900 526 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 OAS1P00973 400 aaKnown RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 IGHG1P01857 330 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 IVLP07476 585 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 TPM1P09493 284 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 SELEP16581 610 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 ZNF10P21506 573 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 UGT1A4P22310 534 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 SLC1A4P43007 532 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 NDUFV3P56181 108 aaKnown RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 SARNPP82979 210 aaKnown RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 IL24Q13007 206 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 CHIT1Q13231 466 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 TFDP1Q14186 410 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 PDK3Q15120 406 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 CD226Q15762 336 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 CNPY1Q3B7I2 92 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 SLX4IPQ5VYV7 408 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 WDR25Q64LD2 544 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-210ENST00000556718 REP15Q6BDI9 236 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 BTNL3Q6UXE8 466 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 TMEM184AQ6ZMB5 413 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 ERICH1Q86X53 443 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 ARL14Q8N4G2 192 aa3.56□□□□□ -1.84
PRPF39-210ENST00000556718 STEAP2Q8NFT2 490 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms