RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 IL11RAQ14626 422 aa12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 EXOC3L2Q2M3D2 409 aa12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 PRAMEF8Q5VWM4 474 aa12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 PRAMEF7Q5VXH5 474 aa12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 OR4C15Q8NGM1 316 aa12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 CYGBQ8WWM9 190 aa12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 PHOX2BQ99453 314 aa12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 PIP5K1AQ99755 562 aa12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 ADI1Q9BV57 179 aa12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 TGIF2Q9GZN2 237 aa12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 NRSN2Q9GZP1 204 aa12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 MTHFD2LQ9H903 347 aaPredicted RBP12.81□□□□□ -0.36
EFCAB11-212ENST00000556639 STX11O75558 287 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 DNAJB5O75953 348 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 NTN1O95631 604 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 IGKV3-11P04433 115 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 HOXB6P17509 224 aaKnown RBP12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 NUBP1P53384 320 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 MAPK10P53779 464 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 TXNL4AP83876 142 aaKnown RBP12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 IL1RL1Q01638 556 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 PDK3Q15120 406 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 ZNF836Q6ZNA1 936 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 OVCH1Q7RTY7 1134 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 HIPK1Q86Z02 1210 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 CHERPQ8IWX8 916 aaKnown RBP12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 SDCCAG3Q96C92 435 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 OSBPL11Q9BXB4 747 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 PINK1Q9BXM7 581 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 LIN28AQ9H9Z2 209 aaKnown RBP12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 SLC39A1Q9NY26 324 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 CALML5Q9NZT1 146 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 ZNF443Q9Y2A4 671 aaPredicted RBP12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 PCDHGB3Q9Y5G1 929 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 B3GALT1Q9Y5Z6 326 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 A0A1W2PNU3 283 aaPredicted RBP12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 CDC14CA4D256 554 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 UGT2B17O75795 530 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 IL7RP16871 459 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 RHCEP18577 417 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 GALNSP34059 522 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 PIGAP37287 484 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 LSM11P83369 360 aaKnown RBP eCLIP12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 ELAVL1Q15717 326 aaKnown RBP12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 DESI1Q6ICB0 168 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 DHRS13Q6UX07 377 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 OFCC1Q8IZS5 231 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 ZNF619Q8N2I2 560 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 PLPP5Q8NEB5 264 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 OR9Q2Q8NGE9 314 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 ZNF347Q96SE7 839 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 MBOAT4Q96T53 435 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 SPSB2Q99619 263 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 SPATA5L1Q9BVQ7 753 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 TOR3AQ9H497 397 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 FBXO8Q9NRD0 319 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 NCDNQ9UBB6 729 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 A4GNTQ9UNA3 340 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 SATB2Q9UPW6 733 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 FAM32AQ9Y421 112 aaKnown RBP12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 FREM2Q5SZK8 3169 aa12.8□□□□□ -0.36
EFCAB11-212ENST00000556639 TRBV4-1A0A0J9YWV2 114 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 AGAP5A6NIR3 686 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 BRINP1O60477 761 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 CPNE3O75131 537 aaKnown RBP12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 HEXBP07686 556 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 THRBP10828 461 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 CCKBRP32239 447 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 TRHRP34981 398 aaPredicted RBP12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 PLAURQ03405 335 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 ZNHIT3Q15649 155 aaPredicted RBP12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 CSRP2Q16527 193 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 SLC36A3Q495N2 470 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 RASSF5Q8WWW0 418 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 C8orf44Q96CB5 159 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 EPYCQ99645 322 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 RBM4BQ9BQ04 359 aaKnown RBP12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 PELOQ9BRX2 385 aaKnown RBP12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 RBM4Q9BWF3 364 aaKnown RBP12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 ULBP3Q9BZM4 244 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 SAP130Q9H0E3 1048 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 NXF5Q9H1B4 397 aaKnown RBP12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 NMNAT1Q9HAN9 279 aaPredicted RBP12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 LOXL2Q9Y4K0 774 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 MUC6Q6W4X9 2439 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 CUL9Q8IWT3 2517 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 VSTM2BA6NLU5 285 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 ADAMDEC1O15204 470 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 KIAA0513O60268 411 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 GADD45GO95257 159 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 PRG2P13727 222 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 ITGA2P17301 1181 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 LIMS1P48059 325 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 HSPA13P48723 471 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 SEC23BQ15437 767 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 UGT2A3Q6UWM9 527 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 C9orf40Q8IXQ3 194 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 PEX5LQ8IYB4 626 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 PRR22Q8IZ63 422 aa12.79□□□□□ -0.36
EFCAB11-212ENST00000556639 MARVELD2Q8N4S9 558 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms