RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 ERV3-1Q14264 604 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 SNAP47Q5SQN1 464 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 GPR135Q8IZ08 494 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 ZNF619Q8N2I2 560 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 COX18Q8N8Q8 333 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 C7orf57Q8NEG2 295 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 OR1L3Q8NH93 324 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 OR1F2PQ96R84 312 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 NUDT22Q9BRQ3 303 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 LMF2Q9BU23 707 aaKnown RBP13.7□□□□□ -0.22
VPS33B-205ENST00000556096 FNDC11Q9BVV2 318 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 ADNPQ9H2P0 1102 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 ZNF443Q9Y2A4 671 aaPredicted RBP13.7□□□□□ -0.22
VPS33B-205ENST00000556096 CHST2Q9Y4C5 530 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 MMACHCQ9Y4U1 282 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 U3KQA8 63 aa13.7□□□□□ -0.22
VPS33B-205ENST00000556096 PIEZO1Q92508 2521 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 SCN2AQ99250 2005 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 AGAP5A6NIR3 686 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 CER1O95813 267 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 GASTP01350 101 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 IL7RP16871 459 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 ESRRGP62508 458 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 POU6F2P78424 691 aaPredicted RBP13.69□□□□□ -0.22
VPS33B-205ENST00000556096 LARS2Q15031 903 aaKnown RBP13.69□□□□□ -0.22
VPS33B-205ENST00000556096 NPTX1Q15818 432 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 FGD3Q5JSP0 725 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 ZNF773Q6PK81 442 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 TTLL10Q6ZVT0 673 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 HMGN2P46Q86SG4 172 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 AQP11Q8NBQ7 271 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 GPR151Q8TDV0 419 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 DGCR14Q96DF8 476 aaKnown RBP13.69□□□□□ -0.22
VPS33B-205ENST00000556096 CXorf56Q9H5V9 222 aa13.69□□□□□ -0.22
VPS33B-205ENST00000556096 SH3PXD2BA1X283 911 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 A8MU76 341 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 SIGLEC6O43699 453 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 CDC123O75794 336 aaPredicted RBP13.68□□□□□ -0.22
VPS33B-205ENST00000556096 DBIP07108 87 aaKnown RBP13.68□□□□□ -0.22
VPS33B-205ENST00000556096 SYPP08247 313 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 ANKRD34CP0C6C1 535 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 GABRA3P34903 492 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 GGT2P36268 569 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 EMDP50402 254 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 FUT7Q11130 342 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 ZNF155Q12901 538 aaPredicted RBP13.68□□□□□ -0.22
VPS33B-205ENST00000556096 MAD2L1BPQ15013 274 aaPredicted RBP13.68□□□□□ -0.22
VPS33B-205ENST00000556096 SEC23BQ15437 767 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 ZNHIT3Q15649 155 aaPredicted RBP13.68□□□□□ -0.22
VPS33B-205ENST00000556096 CSRP2Q16527 193 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 EIPR1Q53HC9 387 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 GUSBP11Q6P575 273 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 PRR23CQ6ZRP0 262 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 METTL27Q8N6F8 245 aaPredicted RBP13.68□□□□□ -0.22
VPS33B-205ENST00000556096 SLC7A13Q8TCU3 470 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 PIK3R3Q92569 461 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 ZNF501Q96CX3 271 aaPredicted RBP13.68□□□□□ -0.22
VPS33B-205ENST00000556096 NDC1Q9BTX1 674 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 DGCR6LQ9BY27 220 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 FOLH1BQ9HBA9 442 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 LANCL2Q9NS86 450 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 PCDHGA6Q9Y5G7 932 aa13.68□□□□□ -0.22
VPS33B-205ENST00000556096 HEMK1Q9Y5R4 338 aaPredicted RBP13.68□□□□□ -0.22
VPS33B-205ENST00000556096 TTC36A6NLP5 189 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 SLC1A7O00341 560 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 DSCR3O14972 297 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 KIAA0513O60268 411 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 BRINP1O60477 761 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 ANGPTL1O95841 491 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 MAOAP21397 527 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 AGXTP21549 392 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 ALAS2P22557 587 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 EEF1A1P68104 462 aaKnown RBP13.67□□□□□ -0.22
VPS33B-205ENST00000556096 DSG2Q14126 1118 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 PROX2Q3B8N5 592 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 CCNJQ5T5M9 372 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 BROXQ5VW32 411 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 KLHL17Q6TDP4 642 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 CCDC71Q8IV32 467 aaPredicted RBP13.67□□□□□ -0.22
VPS33B-205ENST00000556096 CLIP4Q8N3C7 705 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 NAT6Q93015 286 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 DPYSL5Q9BPU6 564 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 EDEM2Q9BV94 578 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 RBM38Q9H0Z9 239 aaKnown RBP13.67□□□□□ -0.22
VPS33B-205ENST00000556096 ANKRD19PQ9H560 264 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 EVA1AQ9H8M9 152 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 FANCEQ9HB96 536 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 NECTIN3Q9NQS3 549 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 MAN2C1Q9NTJ4 1040 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 GPR55Q9Y2T6 319 aaPredicted RBP13.67□□□□□ -0.22
VPS33B-205ENST00000556096 MAU2Q9Y6X3 613 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 CPED1A4D0V7 1026 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 OR10H3O60404 316 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 TPST2O60704 377 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 PRAMEF2O60811 474 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 ABCB7O75027 752 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 OR6B1O95007 311 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 CPNE6O95741 557 aa13.67□□□□□ -0.22
VPS33B-205ENST00000556096 EEF1B2P24534 225 aaKnown RBP13.67□□□□□ -0.22
VPS33B-205ENST00000556096 IFNA8P32881 189 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms