RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 DESI1Q6ICB0 168 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 AAGABQ6PD74 315 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 ZCCHC12Q6PEW1 402 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 SEM1Q6ZVN7 128 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 ADGRE4PQ86SQ3 457 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 CROCCP2Q86T23 111 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 IFNEQ86WN2 208 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 KIRREL3Q8IZU9 778 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 OR14L1PQ8NHC6 308 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 TAS2R10Q9NYW0 307 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 CBLCQ9ULV8 474 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 MAPRE3Q9UPY8 281 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 SLC6A5Q9Y345 797 aa10.77□□□□□ -0.69
VRK1-204ENST00000555351 PDZD2O15018 2839 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 PKDREJQ9NTG1 2253 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 BIRC5O15392 142 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 SPAG7O75391 227 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 LYPLA1O75608 230 aaPredicted RBP10.76□□□□□ -0.69
VRK1-204ENST00000555351 NKX2-2O95096 273 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 KCNH1O95259 989 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 HSPA4LO95757 839 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 NGFRP08138 427 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 BCKDHAP12694 445 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 CYP4B1P13584 511 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 EVI2BP34910 448 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 OPRM1P35372 400 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 ASCL1P50553 236 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 MANFP55145 182 aaKnown RBP10.76□□□□□ -0.69
VRK1-204ENST00000555351 DSCR4P56555 118 aaPredicted RBP10.76□□□□□ -0.69
VRK1-204ENST00000555351 RPL38P63173 70 aaKnown RBP10.76□□□□□ -0.69
VRK1-204ENST00000555351 TLE4Q04727 773 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 GAB1Q13480 694 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 GLYR1Q49A26 553 aaPredicted RBP10.76□□□□□ -0.69
VRK1-204ENST00000555351 SH2D4BQ5SQS7 431 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 CES4AQ5XG92 561 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 YRDCQ86U90 279 aaKnown RBP10.76□□□□□ -0.69
VRK1-204ENST00000555351 LIX1LQ8IVB5 337 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 DDIASQ8IXT1 998 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 FADS6Q8N9I5 356 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 CDRT4Q8N9R6 151 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 OR4N2Q8NGD1 307 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 GOT1L1Q8NHS2 421 aaPredicted RBP10.76□□□□□ -0.69
VRK1-204ENST00000555351 TSSK3Q96PN8 268 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 TM9SF2Q99805 663 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 ACBD3Q9H3P7 528 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 GIN1Q9NXP7 522 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 ATP6V1HQ9UI12 483 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 RAB21Q9UL25 225 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 CAMK2AQ9UQM7 478 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 PTGDR2Q9Y5Y4 395 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 ADGRG4Q8IZF6 3080 aa10.76□□□□□ -0.69
VRK1-204ENST00000555351 CREBBPQ92793 2442 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 FREM3P0C091 2139 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 IGLV3-32A0A0A0MS00 114 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 PIP5K1BO14986 540 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 TM9SF1O15321 606 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 CTIFO43310 598 aaKnown RBP10.75□□□□□ -0.69
VRK1-204ENST00000555351 CTSSP25774 331 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 DPP4P27487 766 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 GPC1P35052 558 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 HPCAL1P37235 193 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 C21orf58P58505 322 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 PRR5P85299 388 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 OCRLQ01968 901 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 C17orf67Q0P5P2 114 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 HSPB3Q12988 150 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 MAD2L1Q13257 205 aaPredicted RBP10.75□□□□□ -0.69
VRK1-204ENST00000555351 GALNTL6Q49A17 601 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 ATP6AP1LQ52LC2 224 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 DCST1Q5T197 706 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 POMZP3Q6PJE2 187 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 ZNF551Q7Z340 670 aaPredicted RBP10.75□□□□□ -0.69
VRK1-204ENST00000555351 TRIM42Q8IWZ5 723 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 TNIP2Q8NFZ5 429 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 OR4K17Q8NGC6 315 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 PSMA8Q8TAA3 256 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 WNT2BQ93097 391 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 EFHD2Q96C19 240 aaPredicted RBP10.75□□□□□ -0.69
VRK1-204ENST00000555351 MS4A4EQ96PG1 132 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 MECRQ9BV79 373 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 PARD6BQ9BYG5 372 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 PTGES2Q9H7Z7 377 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 ATAD3AQ9NVI7 634 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 SH3BP4Q9P0V3 963 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 PPP4R1LQ9P1A2 415 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 FBXL2Q9UKC9 423 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.75□□□□□ -0.69
VRK1-204ENST00000555351 FIS1Q9Y3D6 152 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 L3MBTL1Q9Y468 752 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 ACTL7BQ9Y614 415 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 DCHS2Q6V1P9 2916 aa10.75□□□□□ -0.69
VRK1-204ENST00000555351 C2orf72A6NCS6 295 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 TMEM233B4DJY2 109 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 SCAMP2O15127 329 aaKnown RBP10.74□□□□□ -0.69
VRK1-204ENST00000555351 RGS16O15492 202 aaPredicted RBP10.74□□□□□ -0.69
VRK1-204ENST00000555351 EMC8O43402 210 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 ZIC3O60481 467 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 NME6O75414 186 aaPredicted RBP10.74□□□□□ -0.69
VRK1-204ENST00000555351 RCBTB2O95199 551 aa10.74□□□□□ -0.69
VRK1-204ENST00000555351 PEPDP12955 493 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms