RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 SLC25A25Q6KCM7 469 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 RPUSD3Q6P087 351 aaKnown RBP11.66□□□□□ -0.54
SYNE2-219ENST00000555323 TNFAIP8L2Q6P589 184 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-219ENST00000555323 C6orf89Q6UWU4 347 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 ANGPTL8Q6UXH0 198 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 MDGA2Q7Z553 956 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 PRR22Q8IZ63 422 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 CYP4Z2PQ8N1L4 340 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 C10orf111Q8N326 155 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 FBXO30Q8TB52 745 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 PNPT1Q8TCS8 783 aaKnown RBP11.66□□□□□ -0.54
SYNE2-219ENST00000555323 SPPL2AQ8TCT8 520 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 PMM1Q92871 262 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 RAB8BQ92930 207 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 RMND5BQ96G75 393 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-219ENST00000555323 TRNT1Q96Q11 434 aaKnown RBP11.66□□□□□ -0.54
SYNE2-219ENST00000555323 UBL7Q96S82 380 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-219ENST00000555323 ADOQ96SZ5 270 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 THUMPD3Q9BV44 507 aaKnown RBP11.66□□□□□ -0.54
SYNE2-219ENST00000555323 TMEM38AQ9H6F2 299 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 KAT8Q9H7Z6 458 aaKnown RBP11.66□□□□□ -0.54
SYNE2-219ENST00000555323 IL1RL2Q9HB29 575 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 ZNF71Q9NQZ8 489 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-219ENST00000555323 POLE3Q9NRF9 147 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 ANKRD10Q9NXR5 420 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-219ENST00000555323 LHX6Q9UPM6 363 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 CSAG2Q9Y5P2 127 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 C15orf38-AP3S2A0A0A6YYH1 394 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 CCT8L1PA6NM43 557 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 ATXN7O15265 892 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-219ENST00000555323 STX11O75558 287 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 F10P00742 488 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 SP1P08047 785 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 NGFRP08138 427 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 ESRRAP11474 423 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-219ENST00000555323 ETFAP13804 333 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 CD46P15529 392 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 CNR1P21554 472 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 CALB2P22676 271 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 KRT20P35900 424 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 ST13P50502 369 aaKnown RBP11.65□□□□□ -0.54
SYNE2-219ENST00000555323 GZMMP51124 257 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 FBXW4P57775 412 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 DSTNP60981 165 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 RPP38P78345 283 aaKnown RBP11.65□□□□□ -0.54
SYNE2-219ENST00000555323 FUT5Q11128 374 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 SNTA1Q13424 505 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 SELPLGQ14242 412 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 CAPRIN1Q14444 709 aaKnown RBP11.65□□□□□ -0.54
SYNE2-219ENST00000555323 MAPK11Q15759 364 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 DCST2Q5T1A1 773 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 ATAD3BQ5T9A4 648 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 NET1Q7Z628 596 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-219ENST00000555323 ARPINQ7Z6K5 226 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 SERPINA11Q86U17 422 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 SLC15A3Q8IY34 581 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 METTL25Q8N6Q8 603 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 PSD4Q8NDX1 1056 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 OR10G3Q8NGC4 313 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 OIT3Q8WWZ8 545 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 TMEM125Q96AQ2 219 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 EFHD2Q96C19 240 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-219ENST00000555323 TMCO6Q96DC7 493 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 OTUB1Q96FW1 271 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-219ENST00000555323 SLC39A3Q9BRY0 314 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 ZNF350Q9GZX5 532 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.65□□□□□ -0.54
SYNE2-219ENST00000555323 PROK2Q9HC23 129 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 TIMMDC1Q9NPL8 285 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 FBXO34Q9NWN3 711 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 CNOT11Q9UKZ1 510 aaKnown RBP11.65□□□□□ -0.54
SYNE2-219ENST00000555323 B3GNT3Q9Y2A9 372 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 AP3M1Q9Y2T2 418 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 CNTRLQ7Z7A1 2325 aa11.65□□□□□ -0.54
SYNE2-219ENST00000555323 DSPP15924 2871 aaKnown RBP11.65□□□□□ -0.55
SYNE2-219ENST00000555323 NPIPB9F8W1W9 429 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 NME2P1O60361 137 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 FADS1O60427 444 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 FCMRO60667 390 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 SLC25A12O75746 678 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 CBX6O95503 412 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 NUDT7P0C024 238 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 CYP4B1P13584 511 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 TBXA2RP21731 343 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 NME2P22392 152 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 IL12BP29460 328 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 PTGDSP41222 190 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 CASP3P42574 277 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 NUDT2P50583 147 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 MTPNP58546 118 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 RBBP4Q09028 425 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 LY6DQ14210 128 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 GNA13Q14344 377 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 ZNF169Q14929 603 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-219ENST00000555323 ADRM1Q16186 407 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 RABL3Q5HYI8 236 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 TBCELQ5QJ74 424 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 CCNJQ5T5M9 372 aa11.64□□□□□ -0.55
SYNE2-219ENST00000555323 PRAMEF8Q5VWM4 474 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms