RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 RASSF5Q8WWW0 418 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 SLC38A4Q969I6 547 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 RERGQ96A58 199 aaPredicted RBP16.23■□□□□ 0.19
SHOX-204ENST00000554971 TAS2R7Q9NYW3 318 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 SH3D21A4FU49 640 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 SAP18O00422 153 aaKnown RBP16.22■□□□□ 0.19
SHOX-204ENST00000554971 PSMB9P28065 219 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 RORAP35398 523 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 UGT2B10P36537 528 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 FRKP42685 505 aaPredicted RBP16.22■□□□□ 0.19
SHOX-204ENST00000554971 RHBDD2Q6NTF9 364 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 ZNF554Q86TJ5 538 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 SHISA5Q8N114 240 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 LGI4Q8N135 537 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 MINDY2Q8NBR6 621 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 TTLQ8NG68 377 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 CRELD1Q96HD1 420 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 COPS4Q9BT78 406 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 ITPAQ9BY32 194 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 KLHL31Q9H511 634 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 ACSS1Q9NUB1 689 aaPredicted RBP16.22■□□□□ 0.19
SHOX-204ENST00000554971 ACER3Q9NUN7 267 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 IRAK4Q9NWZ3 460 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 KCND3Q9UK17 655 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 MAP4K5Q9Y4K4 846 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 SMG1Q96Q15 3661 aaKnown RBP16.22■□□□□ 0.19
SHOX-204ENST00000554971 BSNQ9UPA5 3926 aa16.22■□□□□ 0.19
SHOX-204ENST00000554971 HYKKA2RU49 373 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 C1QTNF9BB2RNN3 333 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 TLX3O43711 291 aaPredicted RBP16.21■□□□□ 0.19
SHOX-204ENST00000554971 CCNB2O95067 398 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 GBAP04062 536 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 IFNW1P05000 195 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 C1QTNF9P0C862 333 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 BSGP35613 385 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 MAP2K4P45985 399 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 CDH12P55289 794 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 GRM7Q14831 915 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 RGS21Q2M5E4 152 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 PRSS41Q7RTY9 318 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 DTX1Q86Y01 620 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 PSMA8Q8TAA3 256 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 C9orf43Q8TAL5 461 aaPredicted RBP16.21■□□□□ 0.19
SHOX-204ENST00000554971 RGMAQ96B86 450 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 TM4SF18Q96CE8 201 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 ZNF578Q96N58 590 aaPredicted RBP16.21■□□□□ 0.19
SHOX-204ENST00000554971 RASSF1Q9NS23 344 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 CUTCQ9NTM9 273 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 A3GALT2U3KPV4 340 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.21■□□□□ 0.19
SHOX-204ENST00000554971 PLPP1O14494 284 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 CPNE3O75131 537 aaKnown RBP16.21■□□□□ 0.19
SHOX-204ENST00000554971 SULT1C4O75897 302 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 SERPIND1P05546 499 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 CDK1P06493 297 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 RANBP1P43487 201 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 ARFIP1P53367 373 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 EXOC3L2Q2M3D2 409 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 ADPRMQ3LIE5 342 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 LCN10Q6JVE6 187 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 ZNF517Q6ZMY9 492 aaPredicted RBP16.21■□□□□ 0.19
SHOX-204ENST00000554971 DCDC5Q6ZRR9 648 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 TTLL10Q6ZVT0 673 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 CAMKVQ8NCB2 501 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 GALNT6Q8NCL4 622 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 DYNC2LI1Q8TCX1 351 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 ZBED6CLQ96FA7 236 aaPredicted RBP16.21■□□□□ 0.19
SHOX-204ENST00000554971 ZNF717Q9BY31 904 aaPredicted RBP16.21■□□□□ 0.19
SHOX-204ENST00000554971 GIN1Q9NXP7 522 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 DKK4Q9UBT3 224 aa16.21■□□□□ 0.19
SHOX-204ENST00000554971 C5orf58C9J3I9 102 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 PDPK1O15530 556 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 FOXS1O43638 330 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 GADD45GO95257 159 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 OXSR1O95747 527 aaPredicted RBP16.2■□□□□ 0.18
SHOX-204ENST00000554971 FADS2O95864 444 aaKnown RBP16.2■□□□□ 0.18
SHOX-204ENST00000554971 SLC35G6P0C7Q6 338 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 DRD2P14416 443 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 GABRB1P18505 474 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 SOAT1P35610 550 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 MANFP55145 182 aaKnown RBP16.2■□□□□ 0.18
SHOX-204ENST00000554971 PCBP4P57723 403 aaKnown RBP16.2■□□□□ 0.18
SHOX-204ENST00000554971 SMIM11AP58511 58 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 OLR1P78380 273 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 TGIF1Q15583 401 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 SMN1Q16637 294 aaKnown RBP16.2■□□□□ 0.18
SHOX-204ENST00000554971 ANKDD1AQ495B1 522 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 AHSA2Q719I0 299 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 NUDT13Q86X67 352 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 NT5CQ8TCD5 201 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 ABTB1Q969K4 478 aaPredicted RBP16.2■□□□□ 0.18
SHOX-204ENST00000554971 LGALS12Q96DT0 336 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 COL21A1Q96P44 957 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 KCNC2Q96PR1 638 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 AKIP1Q9NQ31 210 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 EHD3Q9NZN3 535 aa16.2■□□□□ 0.18
SHOX-204ENST00000554971 LRIT2A6NDA9 550 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 STMND1H3BQB6 276 aa16.19■□□□□ 0.18
SHOX-204ENST00000554971 KPNA4O00629 521 aaPredicted RBP16.19■□□□□ 0.18
SHOX-204ENST00000554971 CLEC3AO75596 197 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms