RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 OR1A2Q9Y585 309 aa4□□□□□ -1.77
SCFD1-211ENST00000554437 UMODL1Q5DID0 1318 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 SALL1Q9NSC2 1324 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 A0A1B0GTH9 108 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 ATP6AP2A0A1C7CYW4 349 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 GSAPA4D1B5 854 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 HELTA6NFD8 242 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 NEDD8-MDP1E9PL57 170 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 WRBO00258 174 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 CCSO14618 274 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 PHF1O43189 567 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-211ENST00000554437 LRRTM2O43300 516 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 ZNF208O43345 1280 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 LRP3O75074 770 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 FLOT1O75955 427 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 CA3P07451 260 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 SFTPBP07988 381 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 NUDT17P0C025 328 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 ZCCHC18P0CG32 403 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 GNSP15586 552 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 PPP2R1AP30153 589 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 PRDX2P32119 198 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 OR1D2P34982 312 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 ID1P41134 155 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 GSK3BP49841 420 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 CCR4P51679 360 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 PRELPP51888 382 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 LIMK2P53671 638 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 PRMT2P55345 433 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 CARD18P57730 90 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 RPS8P62241 208 aaKnown RBP3.99□□□□□ -1.77
SCFD1-211ENST00000554437 CBX1P83916 185 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 MYBPC1Q00872 1141 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 SYCP1Q15431 976 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 ADPRMQ3LIE5 342 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 FBXO48Q5FWF7 155 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 RABGAP1LQ5R372 815 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 AGAP7PQ5VUJ5 663 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 CAPN13Q6MZZ7 669 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-211ENST00000554437 LRRC8BQ6P9F7 803 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 EMBQ6PCB8 327 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 PAQR9Q6ZVX9 377 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 UBQLNLQ8IYU4 475 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 SLC39A11Q8N1S5 342 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 LRRC17Q8N6Y2 441 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 NECAB1Q8N987 351 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 CSNK1G2-AS1Q8NCQ2 148 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 TRPV3Q8NET8 790 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 OR4Q3Q8NH05 313 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 OR8K3Q8NH51 312 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 SLC22A8Q8TCC7 542 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 STARD8Q92502 1023 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 C11orf24Q96F05 449 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-211ENST00000554437 LIME1Q9H400 295 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 DPEP3Q9H4B8 488 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 ZDHHC6Q9H6R6 413 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 DCLRE1BQ9H816 532 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 FN3KRPQ9HA64 309 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 RDH8Q9NYR8 311 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 ZNF346Q9UL40 294 aaKnown RBP3.99□□□□□ -1.77
SCFD1-211ENST00000554437 ERVK-19Q9WJR5 959 aa3.99□□□□□ -1.77
SCFD1-211ENST00000554437 IGHV3-16A0A0C4DH30 117 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 MBLAC1A4D2B0 266 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-211ENST00000554437 EEF2KO00418 725 aaKnown RBP3.98□□□□□ -1.77
SCFD1-211ENST00000554437 PDXKO00764 312 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 RNF113AO15541 343 aaKnown RBP3.98□□□□□ -1.77
SCFD1-211ENST00000554437 CTAG2O75638 210 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 OR4F21O95013 312 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 STBD1O95210 358 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 IGHG1P01857 330 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 MT-ND1P03886 318 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 CSF2P04141 144 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 RALBP11234 206 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 ANPEPP15144 967 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 PTBP1P26599 531 aaKnown RBP eCLIP3.98□□□□□ -1.77
SCFD1-211ENST00000554437 RDXP35241 583 aaKnown RBP3.98□□□□□ -1.77
SCFD1-211ENST00000554437 DLSTP36957 453 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 CEBPDP49716 269 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-211ENST00000554437 CCL11P51671 97 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 EIF3EP60228 445 aaKnown RBP3.98□□□□□ -1.77
SCFD1-211ENST00000554437 RPL23AP62750 156 aaKnown RBP3.98□□□□□ -1.77
SCFD1-211ENST00000554437 NUCB2P80303 420 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 GABPAQ06546 454 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 HSPA14Q0VDF9 509 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 FUT7Q11130 342 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 STX1AQ16623 288 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 TMEM44Q2T9K0 475 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 C15orf32Q32M92 178 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 CMPK2Q5EBM0 449 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 SLC25A30Q5SVS4 291 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 REG3GQ6UW15 175 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 CEACAM19Q7Z692 300 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 UBE2J2Q8N2K1 259 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-211ENST00000554437 TCP11Q8WWU5 503 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 NCLNQ969V3 563 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 GUCD1Q96NT3 240 aa3.98□□□□□ -1.77
SCFD1-211ENST00000554437 PAIP2Q9BPZ3 127 aaKnown RBP3.98□□□□□ -1.77
SCFD1-211ENST00000554437 SIKE1Q9BRV8 207 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms