RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 FLI1Q01543 452 aaPredicted RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 TARDBPQ13148 414 aaKnown RBP eCLIP2.54□□□□□ -2
PRPF39-206ENST00000554429 PDE7AQ13946 482 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MESDQ14696 234 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SMCO1Q147U7 214 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 DLG2Q15700 870 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 LTB4RQ15722 352 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 AGBL4Q5VU57 503 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FAM91A1Q658Y4 838 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 HMBOX1Q6NT76 420 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 BHLHB9Q6PI77 547 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 UQCC3Q6UW78 93 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ARSKQ6UWY0 536 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PRSS57Q6UWY2 283 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PGAP1Q75T13 922 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ARCQ7LC44 396 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CXXC5Q7LFL8 322 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 FUNDC1Q8IVP5 155 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 AQP12AQ8IXF9 295 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ZNF683Q8IZ20 524 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PDIK1LQ8N165 341 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 GHDCQ8N2G8 530 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 DEFB119Q8N690 84 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PNPLA1Q8N8W4 532 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 C12orf29Q8N999 325 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 NETO2Q8NC67 525 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 NUDT10Q8NFP7 164 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 VANGL1Q8TAA9 524 aaPredicted RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 TBC1D15Q8TC07 691 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ELMO1Q92556 727 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 DAZLQ92904 295 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 NXNL1Q96CM4 212 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 HAUS1Q96CS2 278 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 HAVCR1Q96D42 359 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 BOD1Q96IK1 185 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 THOC3Q96J01 351 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 CLPTM1LQ96KA5 538 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ZNF285Q96NJ3 590 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SERPINB11Q96P15 392 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 BBS4Q96RK4 519 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 RBM15Q96T37 977 aaKnown RBP eCLIP2.54□□□□□ -2
PRPF39-206ENST00000554429 KLHDC3Q9BQ90 382 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 IFT27Q9BW83 186 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 STRADBQ9C0K7 418 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 RAB1BQ9H0U4 201 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 LRRN3Q9H3W5 708 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 ACTL8Q9H568 366 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 IL1RAPQ9NPH3 570 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 OLAHQ9NV23 265 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 RMND1Q9NWS8 449 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 SEMA5BQ9P283 1151 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 RWDD2AQ9UIY3 292 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 CRLS1Q9UJA2 301 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FBXL7Q9UJT9 491 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 PSMD13Q9UNM6 376 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 HS3ST2Q9Y278 367 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 MRPS33Q9Y291 106 aaKnown RBP2.54□□□□□ -2
PRPF39-206ENST00000554429 SNX24Q9Y343 169 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 GRIP1Q9Y3R0 1128 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 FRYLO94915 3013 aa2.54□□□□□ -2
PRPF39-206ENST00000554429 IGLV3-10A0A075B6K4 115 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 A0A087X0T9 212 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 A0A0A6YYH2 397 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 TEX13CA0A0J9YWL9 993 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 A0A1B0GUH1 482 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 A0A1W2PRB8 838 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 A6NJ64 397 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 DRGXA6NNA5 263 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 DLGAP1O14490 977 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 TRAFD1O14545 582 aaPredicted RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 ARPC3O15145 178 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 LIASO43766 372 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 PRICKLE3O43900 615 aaPredicted RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 HCN1O60741 890 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 MMP20O60882 483 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 WBP4O75554 376 aaKnown RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 APOC1P02654 83 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 CELA3BP08861 270 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 OR2T7P0C7T2 308 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 FAM228BP0C875 321 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 NCK1P16333 377 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 CNR1P21554 472 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 TGM2P21980 687 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 ITPKBP27987 946 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 ADORA2BP29275 332 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 CCKBRP32239 447 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 SLC8A1P32418 973 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 STX2P32856 288 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 RCVRNP35243 200 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 CYLC1P35663 651 aaPredicted RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 CSKP41240 450 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 WASP42768 502 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 PREPP48147 710 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 SGSHP51688 502 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 PNLIPRP2P54317 469 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 EMP2P54851 167 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 OR2B6P58173 313 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 ATP6V0D1P61421 351 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 RPL7AP62424 266 aaKnown RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 ECT2LQ008S8 904 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms