RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 HPCAL1P37235 193 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 SLC1A6P48664 564 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 TRPC1P48995 793 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 SLC18A1P54219 525 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 GAS1P54826 345 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 PSMD4P55036 377 aaKnown RBP6.86□□□□□ -1.31
LINC00640-201ENST00000554409 MANFP55145 182 aaKnown RBP6.86□□□□□ -1.31
LINC00640-201ENST00000554409 NUP107P57740 925 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 RELBQ01201 579 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 EMX2Q04743 252 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 HSPB3Q12988 150 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 MPP2Q14168 576 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 DECR1Q16698 335 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 EXOSC6Q5RKV6 272 aaKnown RBP6.86□□□□□ -1.31
LINC00640-201ENST00000554409 BEND6Q5SZJ8 279 aaPredicted RBP6.86□□□□□ -1.31
LINC00640-201ENST00000554409 C1orf185Q5T7R7 199 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 IL23RQ5VWK5 629 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 VASNQ6EMK4 673 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 ANKRD26P1Q6NSI1 321 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 ZNF585AQ6P3V2 769 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 ZCCHC12Q6PEW1 402 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 B3GNT6Q6ZMB0 384 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 PLCZ1Q86YW0 608 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 RIMKLAQ8IXN7 391 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 PM20D2Q8IYS1 436 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 ULK2Q8IYT8 1036 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 NATD1Q8N6N6 113 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 ZNF781Q8N8C0 355 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 CDRT4Q8N9R6 151 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 WDSUB1Q8N9V3 476 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 FNDC5Q8NAU1 212 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 FAM83FQ8NEG4 500 aaPredicted RBP6.86□□□□□ -1.31
LINC00640-201ENST00000554409 OR4N2Q8NGD1 307 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 OR5M9Q8NGP3 310 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 CEP70Q8NHQ1 597 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 CLHC1Q8NHS4 586 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 PSMA8Q8TAA3 256 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 CA5BP1Q8WTZ4 195 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 EFHD2Q96C19 240 aaPredicted RBP6.86□□□□□ -1.31
LINC00640-201ENST00000554409 GIMAP5Q96F15 307 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 MS4A4EQ96PG1 132 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 SORT1Q99523 831 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 TREX2Q9BQ50 279 aaPredicted RBP6.86□□□□□ -1.31
LINC00640-201ENST00000554409 OR2B2Q9GZK3 357 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 C20orf27Q9GZN8 174 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 PRDM14Q9GZV8 571 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 CENPHQ9H3R5 247 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 C3orf14Q9HBI5 128 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 ATAD3AQ9NVI7 634 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 NOP53Q9NZM5 478 aaKnown RBP6.86□□□□□ -1.31
LINC00640-201ENST00000554409 SH3BP4Q9P0V3 963 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 TNFRSF10DQ9UBN6 386 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 GIMAP2Q9UG22 337 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 MRTO4Q9UKD2 239 aaKnown RBP6.86□□□□□ -1.31
LINC00640-201ENST00000554409 MAPRE3Q9UPY8 281 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 RNF6Q9Y252 685 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 MRPS18CQ9Y3D5 142 aaKnown RBP6.86□□□□□ -1.31
LINC00640-201ENST00000554409 OR10H1Q9Y4A9 318 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 UNC79Q9P2D8 2635 aa6.86□□□□□ -1.31
LINC00640-201ENST00000554409 C15orf38-AP3S2A0A0A6YYH1 394 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 EMC8O43402 210 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 FADS1O60427 444 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 TRAPPC6AO75865 159 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 NKX2-2O95096 273 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 ACTL6AO96019 429 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 GLI4P10075 376 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 BMP7P18075 431 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 PRPS1L1P21108 318 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 BGNP21810 368 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 SRD5A2P31213 254 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 EVI2BP34910 448 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 GPC1P35052 558 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 GCKP35557 465 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 RPL14P50914 215 aaKnown RBP6.85□□□□□ -1.31
LINC00640-201ENST00000554409 PRR5P85299 388 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 TFF3Q07654 80 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 PMPCAQ10713 525 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 GAB1Q13480 694 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 PTGR1Q14914 329 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 SF3B4Q15427 424 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC00640-201ENST00000554409 VPS26BQ4G0F5 336 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 ACSF3Q4G176 576 aaPredicted RBP6.85□□□□□ -1.31
LINC00640-201ENST00000554409 EIPR1Q53HC9 387 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 WIPI1Q5MNZ9 446 aaPredicted RBP6.85□□□□□ -1.31
LINC00640-201ENST00000554409 RIPPLY2Q5TAB7 128 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 CAMKMTQ7Z624 323 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 FADS6Q8N9I5 356 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 NUP43Q8NFH3 380 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 OR7A2PQ8NGA2 310 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 LILRB4Q8NHJ6 448 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 TLCD1Q96CP7 247 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 TUBGCP3Q96CW5 907 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 COQ8BQ96D53 544 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 PRPF18Q99633 342 aaKnown RBP6.85□□□□□ -1.31
LINC00640-201ENST00000554409 TIMP4Q99727 224 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 SPOCK3Q9BQ16 436 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 C1orf50Q9BV19 199 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 UGT2B28Q9BY64 529 aa6.85□□□□□ -1.31
LINC00640-201ENST00000554409 BHLHE41Q9C0J9 482 aaPredicted RBP6.85□□□□□ -1.31
LINC00640-201ENST00000554409 ENKD1Q9H0I2 346 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms