RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 PRAP1Q96NZ9 151 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 NPAS1Q99742 590 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 PIGUQ9H490 435 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 TRPV4Q9HBA0 871 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 NDUFAF4Q9P032 175 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 HCN3Q9P1Z3 774 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 GLS2Q9UI32 602 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 NDRG2Q9UN36 371 aaKnown RBP8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 ZFR2Q9UPR6 939 aaKnown RBP8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 CORO2BQ9UQ03 480 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 PLEKHM1Q9Y4G2 1056 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 A0A1W2PRB8 838 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 EPOPA6NHQ4 379 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 H7C2Y5 167 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 KHNYNO15037 678 aaKnown RBP8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 SCAMP1O15126 338 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 LINC01565O15544 149 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 SH3BP5O60239 455 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 RNGTTO60942 597 aaKnown RBP8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 TOXO94900 526 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 S100A6P06703 90 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 PSMA1P25786 263 aaKnown RBP8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 EEF1A2Q05639 463 aaKnown RBP8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 SCARB2Q14108 478 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 CST6Q15828 149 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 GCNT6Q5T4J0 391 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 FAHD1Q6P587 224 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 DNAJC22Q8N4W6 341 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 AMER3Q8N944 861 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 APH1BQ8WW43 257 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 ATOH1Q92858 354 aaPredicted RBP8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 CRELD1Q96HD1 420 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 PITHD1Q9GZP4 211 aaPredicted RBP8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 TTYH1Q9H313 450 aaPredicted RBP8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 CXorf36Q9H7Y0 433 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 LHX9Q9NQ69 397 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 GDE1Q9NZC3 331 aa8.5□□□□□ -1.05
AL049839.2-201ENST00000553947 EYSQ5T1H1 3165 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 J3KTA2 159 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 RFXAPO00287 272 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 PPM1DO15297 605 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 APOL3O95236 402 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 LDOC1O95751 146 aaPredicted RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 C9P02748 559 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 ACP5P13686 325 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 SOAT1P35610 550 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 BSGP35613 385 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 HOXA1P49639 335 aaPredicted RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 RPS26P62854 115 aaKnown RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 HNRNPA0Q13151 305 aaKnown RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 IL18Q14116 193 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 IRF4Q15306 451 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 MLF2Q15773 248 aaPredicted RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 C17orf64Q86WR6 236 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 HDDC3Q8N4P3 179 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 OXR1Q8N573 874 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 CLRN3Q8NCR9 226 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 OR52J3Q8NH60 311 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 INSM2Q96T92 566 aaPredicted RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 SHARPINQ9H0F6 387 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 XKR8Q9H6D3 395 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 LDAHQ9H6V9 325 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 RLIMQ9NVW2 624 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 COMMD3Q9UBI1 195 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 PADI2Q9Y2J8 665 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 SNX11Q9Y5W9 270 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 CSNK1G3Q9Y6M4 447 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 DOCK8Q8NF50 2099 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 NUMA1Q14980 2115 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 A0A0G2JN53 185 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 M0R129 80 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 M0R233 179 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 LCMT2O60294 686 aaKnown RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 CFDP00746 253 aaPredicted RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 STATHP02808 62 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 CHMP24386 653 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 CHI3L1P36222 383 aaPredicted RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 SOX3P41225 446 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 SEC13P55735 322 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 TEAD4Q15561 434 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 FAM46CQ5VWP2 391 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 KHDRBS2Q5VWX1 349 aaKnown RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 BICRALQ6AI39 1079 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 KIAA1211LQ6NV74 962 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 KRT78Q8N1N4 520 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 MS4A15Q8N5U1 240 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 DNAJC5GQ8N7S2 189 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 FGF14Q92915 247 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 UBE2E3Q969T4 207 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 TM4SF18Q96CE8 201 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 ZBED6CLQ96FA7 236 aaPredicted RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 MYADMQ96S97 322 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 PIP5K1AQ99755 562 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 PELOQ9BRX2 385 aaKnown RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 RSPO3Q9BXY4 272 aaPredicted RBP8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 TEX101Q9BY14 249 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 MS4A8Q9BY19 250 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 PBX4Q9BYU1 374 aa8.49□□□□□ -1.05
AL049839.2-201ENST00000553947 HDHD2Q9H0R4 259 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms