RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 CCDC189A1A4V9 331 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 HMX2A2RU54 273 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 SHISA8B8ZZ34 492 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 CCDC188H7C350 402 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 OVOL3O00110 214 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 CD5LO43866 347 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 KLHL2O95198 593 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 PDYNP01213 254 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 IFNA2P01563 188 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 TP53P04637 393 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-209ENST00000553308 C8BP07358 591 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 SOD3P08294 240 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 GSTA2P09210 222 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 FCGR2AP12318 317 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 ACVR1BP36896 505 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 CDKN1AP38936 164 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 ZNF844Q08AG5 666 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 CALCOCO2Q13137 446 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 SGCBQ16585 318 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 ERCC6LQ2NKX8 1250 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 TECRLQ5HYJ1 363 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 MROH9Q5TGP6 573 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 ALKBH2Q6NS38 261 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 PPP4R4Q6NUP7 873 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 METTL2BQ6P1Q9 378 aaKnown RBP8.14□□□□□ -1.11
SYNE2-209ENST00000553308 GGNQ86UU5 652 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 HIPK1Q86Z02 1210 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 CCDC116Q8IYX3 515 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 C1orf52Q8N6N3 182 aaKnown RBP8.14□□□□□ -1.11
SYNE2-209ENST00000553308 OR4F6Q8NGB9 312 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 OR6K3Q8NGY3 331 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 LILRB1Q8NHL6 650 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-209ENST00000553308 TMEM158Q8WZ71 300 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 MRRFQ96E11 262 aaKnown RBP8.14□□□□□ -1.11
SYNE2-209ENST00000553308 HBEGFQ99075 208 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 NTMT1Q9BV86 223 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 FAIM2Q9BWQ8 316 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 ACTR6Q9GZN1 396 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 STMN4Q9H169 189 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-209ENST00000553308 ELOVL6Q9H5J4 265 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 PLSCR4Q9NRQ2 329 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 GRHL1Q9NZI5 618 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 WHRNQ9P202 907 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 PCTPQ9UKL6 214 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 PSME2Q9UL46 239 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 EMC9Q9Y3B6 208 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 OR10H1Q9Y4A9 318 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 PPP6CO00743 305 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 PHF1O43189 567 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 TLX2O43763 284 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 GMFGO60234 142 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 FADS1O60427 444 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 BCAS2O75934 225 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 ESRRBO95718 433 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 PLGP00747 810 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 ALDOAP04075 364 aaKnown RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 IL3P08700 152 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 STX2P32856 288 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 EIF1AXP47813 144 aaKnown RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 RPS3AP61247 264 aaKnown RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 PSG6Q00889 435 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 OCRLQ01968 901 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 ZNF155Q12901 538 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 NAB1Q13506 487 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 GANABQ14697 944 aaKnown RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 ETFDHQ16134 617 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 CTU2Q2VPK5 515 aaKnown RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 GGTA1PQ4G0N0 100 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 SH2D4BQ5SQS7 431 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 LGSNQ5TDP6 509 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 LETMD1Q6P1Q0 360 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 KLC3Q6P597 504 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 CCDC91Q7Z6B0 441 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 CCDC25Q86WR0 208 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 PLD6Q8N2A8 252 aaKnown RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 OR7G2Q8NG99 324 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 UHMK1Q8TAS1 419 aaKnown RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 SELENOMQ8WWX9 145 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 NEUROG1Q92886 237 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 GFM2Q969S9 779 aaKnown RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 EXOSC8Q96B26 276 aaKnown RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 MTBPQ96DY7 904 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 C1GALT1C1Q96EU7 318 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 TRMT61AQ96FX7 289 aaKnown RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 SLCO5A1Q9H2Y9 848 aa8.13□□□□□ -1.11
SYNE2-209ENST00000553308 MAGED1Q9Y5V3 778 aaPredicted RBP8.13□□□□□ -1.11
SYNE2-209ENST00000553308 PCNX3Q9H6A9 2034 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 STX16-NPEPL1H3BU86 382 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 LINC01387J3KSC0 135 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 EIF1AYO14602 144 aaKnown RBP8.12□□□□□ -1.11
SYNE2-209ENST00000553308 STX16O14662 325 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 CLOCKO15516 846 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 ADAM11O75078 769 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 SS18L1O75177 396 aaPredicted RBP8.12□□□□□ -1.11
SYNE2-209ENST00000553308 NDUFS7O75251 213 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 IGHV4-39P01824 125 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 DANCRP0C864 163 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 TSPAN8P19075 237 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 IDUAP35475 653 aa8.12□□□□□ -1.11
SYNE2-209ENST00000553308 CTBP2P56545 445 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms