RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 TSGA10Q9BZW7 698 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 C1orf123Q9NWV4 160 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 PILRAQ9UKJ1 303 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 RNF6Q9Y252 685 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 ETV7Q9Y603 341 aa5.68□□□□□ -1.5
VPS29-210ENST00000552130 SPIN1Q9Y657 262 aaPredicted RBP5.68□□□□□ -1.5
VPS29-210ENST00000552130 POLR3AO14802 1390 aaPredicted RBP5.67□□□□□ -1.5
VPS29-210ENST00000552130 A0A1B0GW15 77 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 ATP6AP2A0A1C7CYW4 349 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 NDUFAB1O14561 156 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 DVL1O14640 695 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 RRHO14718 337 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 CLOCKO15516 846 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 TSPAN2O60636 221 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 SCELO95171 688 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 EML2O95834 649 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 GCP02774 474 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 DUTP33316 252 aaKnown RBP5.67□□□□□ -1.5
VPS29-210ENST00000552130 AVPR1AP37288 418 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 GYG1P46976 350 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 OR3A3P47888 321 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 STK19P49842 368 aaPredicted RBP5.67□□□□□ -1.5
VPS29-210ENST00000552130 ART1P52961 327 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 CLDN18P56856 261 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 GUCY1B3Q02153 619 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 RAD51Q06609 339 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 ZNF415Q09FC8 603 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 STX5Q13190 355 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 SNTA1Q13424 505 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 KRT81Q14533 505 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 SLC5A12Q1EHB4 618 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 GPR33Q49SQ1 333 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 ACSF3Q4G176 576 aaPredicted RBP5.67□□□□□ -1.5
VPS29-210ENST00000552130 FAM151BQ6UXP7 276 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 CEACAM20Q6UY09 585 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 RBM44Q6ZP01 1051 aaKnown RBP5.67□□□□□ -1.5
VPS29-210ENST00000552130 ZNF367Q7RTV3 350 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 PID1Q7Z2X4 250 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 GPBP1Q86WP2 473 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 PTOV1Q86YD1 416 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 MFSD6LQ8IWD5 586 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 CMTM8Q8IZV2 173 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 MARVELD2Q8N4S9 558 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 CLDN19Q8N6F1 224 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 HORMAD2Q8N7B1 307 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 ARL14EPQ8N8R7 260 aaPredicted RBP5.67□□□□□ -1.5
VPS29-210ENST00000552130 NPEPL1Q8NDH3 523 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 OR1F12Q8NHA8 337 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 HMGCLL1Q8TB92 370 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 ARRDC2Q8TBH0 407 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 PIH1D2Q8WWB5 315 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 HAS1Q92839 578 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 ECHDC3Q96DC8 303 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 SCRN2Q96FV2 425 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 C12orf42Q96LP6 360 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 NAT9Q9BTE0 207 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 RAB11FIP5Q9BXF6 653 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 DERL2Q9GZP9 239 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 RHOJQ9H4E5 214 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 SLC38A10Q9HBR0 1119 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 POLD4Q9HCU8 107 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 SPAG4Q9NPE6 437 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 ASIC5Q9NY37 505 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 FBXL2Q9UKC9 423 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 PRPF19Q9UMS4 504 aaKnown RBP5.67□□□□□ -1.5
VPS29-210ENST00000552130 MAP3K2Q9Y2U5 619 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 GRIN2DO15399 1336 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 XDHP47989 1333 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 TTC21AQ8NDW8 1320 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 CCDC7Q96M83 1385 aa5.67□□□□□ -1.5
VPS29-210ENST00000552130 A0A0A6YYH2 397 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 SMCO2A6NFE2 343 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 A6NJ64 397 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 YJEFN3A6XGL0 299 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 ZNF99A8MXY4 864 aaPredicted RBP5.66□□□□□ -1.5
VPS29-210ENST00000552130 CENPBD1B2RD01 187 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 H0YL77 283 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 H3BQV1 296 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 RAB29O14966 203 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 SIVA1O15304 175 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 LDB2O43679 373 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 LRCH4O75427 683 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 NOL4O94818 638 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 RPP14O95059 124 aaKnown RBP5.66□□□□□ -1.5
VPS29-210ENST00000552130 CLDN9O95484 217 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 CNR1P21554 472 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 CD82P27701 267 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 BDKRB2P30411 391 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 MNDAP41218 407 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 SLC1A4P43007 532 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 CBX5P45973 191 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 HTR5AP47898 357 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 NPBWR2P48146 333 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 HSPA13P48723 471 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 VAMP7P51809 220 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 CLDN20P56880 219 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 IFFO1Q0D2I5 559 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 SLAMF1Q13291 335 aa5.66□□□□□ -1.5
VPS29-210ENST00000552130 UAP1Q16222 522 aaPredicted RBP5.66□□□□□ -1.5
VPS29-210ENST00000552130 PTPN20Q4JDL3 420 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms