RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 UTS2RQ9UKP6 389 aa6.91□□□□□ -1.3
NEK3-201ENST00000550331 PACSIN3Q9UKS6 424 aa6.91□□□□□ -1.3
NEK3-201ENST00000550331 NFU1Q9UMS0 254 aa6.91□□□□□ -1.3
NEK3-201ENST00000550331 DLGAP4Q9Y2H0 992 aa6.91□□□□□ -1.3
NEK3-201ENST00000550331 WIF1Q9Y5W5 379 aa6.91□□□□□ -1.3
NEK3-201ENST00000550331 HIVEP2P31629 2446 aa6.91□□□□□ -1.3
NEK3-201ENST00000550331 EML6Q6ZMW3 1958 aa6.91□□□□□ -1.3
NEK3-201ENST00000550331 NBEAL1Q6ZS30 2694 aa6.91□□□□□ -1.3
NEK3-201ENST00000550331 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 A0A1W2PNR3 127 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 SH3D21A4FU49 640 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 A8MT66 165 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 FAM171A2A8MVW0 826 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 A8MXE2 369 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 PLOD2O00469 737 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 PPP6CO00743 305 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 CASKO14936 926 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 TSPAN2O60636 221 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 REM1O75628 298 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 TNFSF13O75888 250 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 OR4F21O95013 312 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 ESRRBO95718 433 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 LY6G6DO95868 133 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 CRHP06850 196 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 SBK3P0C264 359 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 CD53P19397 219 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 PCSK6P29122 969 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 IL12BP29460 328 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 KRT20P35900 424 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 GSTM5P46439 218 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 PNLIPRP2P54317 469 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 CDH13P55290 713 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 CLDN18P56856 261 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 MRPS22P82650 360 aaKnown RBP6.9□□□□□ -1.3
NEK3-201ENST00000550331 MRPS35P82673 323 aaKnown RBP6.9□□□□□ -1.3
NEK3-201ENST00000550331 CLCQ05315 142 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 HEPACAMQ14CZ8 416 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 RASA2Q15283 850 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 LTB4RQ15722 352 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 ERCC6LQ2NKX8 1250 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 UBAP2Q5T6F2 1119 aaKnown RBP6.9□□□□□ -1.3
NEK3-201ENST00000550331 SHEQ5VZ18 495 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 OR2A2Q6IF42 318 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 FAM180BQ6P0A1 224 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 RPS27LQ71UM5 84 aaKnown RBP6.9□□□□□ -1.3
NEK3-201ENST00000550331 LUZP2Q86TE4 346 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 LCA5Q86VQ0 697 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 GRAMD2AQ8IUY3 354 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 GCNT2Q8N0V5 402 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 TMBIM1Q969X1 311 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 INTS12Q96CB8 462 aaKnown RBP6.9□□□□□ -1.3
NEK3-201ENST00000550331 VSTM2LQ96N03 204 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 SFXN2Q96NB2 322 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 ZNF382Q96SR6 550 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 ADOQ96SZ5 270 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 HBEGFQ99075 208 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 STMN4Q9H169 189 aaPredicted RBP6.9□□□□□ -1.3
NEK3-201ENST00000550331 NEUROD4Q9HD90 331 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 PFDN4Q9NQP4 134 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 GIMAP4Q9NUV9 329 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 HEY2Q9UBP5 337 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 NDRG3Q9UGV2 375 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 ZNF225Q9UK10 706 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 DKKL1Q9UK85 242 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 FBXL2Q9UKC9 423 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 EIF3LQ9Y262 564 aaKnown RBP6.9□□□□□ -1.3
NEK3-201ENST00000550331 STK38LQ9Y2H1 464 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 TESMINQ9Y4I5 508 aa6.9□□□□□ -1.3
NEK3-201ENST00000550331 ARID1AO14497 2285 aa6.9□□□□□ -1.31
NEK3-201ENST00000550331 A0A1W2PNV4 684 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 GNG14A0A1W2PPG7 69 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 A0A1W2PPR1 153 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 SLC22A20A6NK97 555 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 TRIM49D1C9J1S8 452 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 LINC01387J3KSC0 135 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 MANBAO00462 879 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 PCDH7O60245 1069 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 ZIC3O60481 467 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 PLOD3O60568 738 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 ULK1O75385 1050 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 SUPT7LO94864 414 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 SLITRK5O94991 958 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 IL3P08700 152 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 SNRPAP09012 282 aaKnown RBP6.89□□□□□ -1.31
NEK3-201ENST00000550331 TSPAN8P19075 237 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 FSTP19883 344 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 TAC1P20366 129 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 GRK2P25098 689 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 DPP4P27487 766 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 TIA1P31483 386 aaKnown RBP eCLIP6.89□□□□□ -1.31
NEK3-201ENST00000550331 MPIP34949 423 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 CPOXP36551 454 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 HSD17B3P37058 310 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 STARP49675 285 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 GAS1P54826 345 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 DSCR4P56555 118 aaPredicted RBP6.89□□□□□ -1.31
NEK3-201ENST00000550331 CORO7P57737 925 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 NKX6-1P78426 367 aaPredicted RBP6.89□□□□□ -1.31
NEK3-201ENST00000550331 SRYQ05066 204 aa6.89□□□□□ -1.31
NEK3-201ENST00000550331 ACSM2AQ08AH3 577 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms