RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 C10orf107Q8IVU9 208 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 C4orf33Q8N1A6 199 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 OR2T11Q8NH01 316 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 UBLCP1Q8WVY7 318 aaPredicted RBP12.17□□□□□ -0.46
GCN1-206ENST00000549815 WNT2BQ93097 391 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 LRRC46Q96FV0 321 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 SFXN2Q96NB2 322 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 GATA5Q9BWX5 397 aaPredicted RBP12.17□□□□□ -0.46
GCN1-206ENST00000549815 CXXC4Q9H2H0 198 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 CLEC4MQ9H2X3 399 aaPredicted RBP12.17□□□□□ -0.46
GCN1-206ENST00000549815 TUBB1Q9H4B7 451 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 OR10H1Q9Y4A9 318 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 PTGDR2Q9Y5Y4 395 aa12.17□□□□□ -0.46
GCN1-206ENST00000549815 MTORP42345 2549 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 PRRC2AP48634 2157 aaKnown RBP12.16□□□□□ -0.46
GCN1-206ENST00000549815 SMIM23A6NLE4 172 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 COPEO14579 308 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 TBX19O60806 448 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 IL33O95760 270 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 CD1EP15812 388 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 KRT4P19013 534 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 DPP4P27487 766 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 MAP3K8P41279 467 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 DSCR4P56555 118 aaPredicted RBP12.16□□□□□ -0.46
GCN1-206ENST00000549815 CLDN15P56746 228 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 MRPS22P82650 360 aaKnown RBP12.16□□□□□ -0.46
GCN1-206ENST00000549815 BCL2A1Q16548 175 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 ZNF385BQ569K4 471 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 AAGABQ6PD74 315 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 CDC20BQ86Y33 519 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 OR2M3Q8NG83 312 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 HOXB13Q92826 284 aaPredicted RBP12.16□□□□□ -0.46
GCN1-206ENST00000549815 ZNF764Q96H86 408 aaPredicted RBP12.16□□□□□ -0.46
GCN1-206ENST00000549815 ZFP3Q96NJ6 502 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 TM9SF2Q99805 663 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 FOXC2Q99958 501 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 SFXN3Q9BWM7 321 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 LRTM1Q9HBL6 345 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 DDX18Q9NVP1 670 aaKnown RBP12.16□□□□□ -0.46
GCN1-206ENST00000549815 MKS1Q9NXB0 559 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 ST6GALNAC2Q9UJ37 374 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 DKKL1Q9UK85 242 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 RPH3AQ9Y2J0 694 aaPredicted RBP12.16□□□□□ -0.46
GCN1-206ENST00000549815 C2CD3Q4AC94 2353 aa12.16□□□□□ -0.46
GCN1-206ENST00000549815 SETD2Q9BYW2 2564 aaPredicted RBP12.15□□□□□ -0.46
GCN1-206ENST00000549815 ABCA4P78363 2273 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 TUBAL3A6NHL2 446 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 EEF1E1-BLOC1S5C9J1V9 151 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 SLC28A1O00337 649 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 AZIN1O14977 448 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 EEF1E1O43324 174 aaKnown RBP12.15□□□□□ -0.46
GCN1-206ENST00000549815 SCO2O43819 266 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 SEC22BO75396 215 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 CRCPO75575 148 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 TNFSF13O75888 250 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 TGM6O95932 706 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 IGKV1D-16P01601 117 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 EPXP11678 715 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 SDC1P18827 310 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 NTSP30990 170 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 FRKP42685 505 aaPredicted RBP12.15□□□□□ -0.46
GCN1-206ENST00000549815 DGKQP52824 942 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 SH2D4BQ5SQS7 431 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 KANK2Q63ZY3 851 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 ANKRD26P1Q6NSI1 321 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 ZNF551Q7Z340 670 aaPredicted RBP12.15□□□□□ -0.46
GCN1-206ENST00000549815 KIF18BQ86Y91 864 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 CCDC63Q8NA47 563 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 OR4K17Q8NGC6 315 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 LINC01560Q8TB33 94 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.15□□□□□ -0.46
GCN1-206ENST00000549815 INTS12Q96CB8 462 aaKnown RBP12.15□□□□□ -0.46
GCN1-206ENST00000549815 DTNBP1Q96EV8 351 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 DSN1Q9H410 356 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 Q9N2J8 555 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 CCM2LQ9NUG4 571 aaPredicted RBP12.15□□□□□ -0.46
GCN1-206ENST00000549815 C1orf109Q9NX04 203 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 PPP4R1LQ9P1A2 415 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 ABCG2Q9UNQ0 655 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 DNAJC15Q9Y5T4 150 aa12.15□□□□□ -0.46
GCN1-206ENST00000549815 MAP1AP78559 2803 aaPredicted RBP12.15□□□□□ -0.47
GCN1-206ENST00000549815 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 GXYLT2A0PJZ3 443 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 TTC36A6NLP5 189 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 LSM1O15116 133 aaKnown RBP12.14□□□□□ -0.47
GCN1-206ENST00000549815 RGS14O43566 566 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 NKX2-2O95096 273 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 TCEA1P23193 301 aaKnown RBP12.14□□□□□ -0.47
GCN1-206ENST00000549815 RIPPLY3P57055 190 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 PDE7AQ13946 482 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 DECR1Q16698 335 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 UGT3A2Q3SY77 523 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 RFTN2Q52LD8 501 aaPredicted RBP12.14□□□□□ -0.47
GCN1-206ENST00000549815 APOOLQ6UXV4 268 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 BANPQ8N9N5 519 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 OR2W6PQ8NHA6 318 aa12.14□□□□□ -0.47
GCN1-206ENST00000549815 GFM2Q969S9 779 aaKnown RBP12.14□□□□□ -0.47
GCN1-206ENST00000549815 CIDECQ96AQ7 238 aaPredicted RBP12.14□□□□□ -0.47
GCN1-206ENST00000549815 GIMAP5Q96F15 307 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms