RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 CNIH4Q9P003 139 aa6.09□□□□□ -1.43
TMEM116-208ENST00000549537 SPRR3Q9UBC9 169 aa6.09□□□□□ -1.43
TMEM116-208ENST00000549537 TBK1Q9UHD2 729 aa6.09□□□□□ -1.43
TMEM116-208ENST00000549537 DCDC2Q9UHG0 476 aa6.09□□□□□ -1.43
TMEM116-208ENST00000549537 NPFFR2Q9Y5X5 522 aa6.09□□□□□ -1.43
TMEM116-208ENST00000549537 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.09□□□□□ -1.43
TMEM116-208ENST00000549537 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.43
TMEM116-208ENST00000549537 HCFC1P51610 2035 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ATP6AP2A0A1C7CYW4 349 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 GOLGA6L10A6NI86 522 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 NPIPA2E9PIF3 369 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 NPIPA3F8WFD2 350 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 BCKDKO14874 412 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 RGS13O14921 159 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 PCDH7O60245 1069 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 PLIN3O60664 434 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 HCN1O60741 890 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 GLRA3O75311 464 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 GUCY1B2O75343 617 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ULK1O75385 1050 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ATP6AP2O75787 350 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 LRATO95237 230 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 HNRNPCP07910 306 aaKnown RBP eCLIP6.08□□□□□ -1.44
TMEM116-208ENST00000549537 IL3P08700 152 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 IGFBP2P18065 325 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 CSNK2A2P19784 350 aaPredicted RBP6.08□□□□□ -1.44
TMEM116-208ENST00000549537 NT5EP21589 574 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 FUT4P22083 530 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ACVR2AP27037 513 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ABCD3P28288 659 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 TIA1P31483 386 aaKnown RBP eCLIP6.08□□□□□ -1.442e-7■■■□□ 16.3
TMEM116-208ENST00000549537 CRHR1P34998 444 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 FEN1P39748 380 aaKnown RBP6.08□□□□□ -1.44
TMEM116-208ENST00000549537 PTGDSP41222 190 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 EMDP50402 254 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 RIPPLY3P57055 190 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 NUP107P57740 925 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 DNAJB13P59910 316 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 HMGCS1Q01581 520 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 SLC10A1Q14973 349 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 EXOSC7Q15024 291 aaKnown RBP6.08□□□□□ -1.44
TMEM116-208ENST00000549537 RPS6KA2Q15349 733 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 LTB4RQ15722 352 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 CEBPEQ15744 281 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 PRSS53Q2L4Q9 553 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 GXYLT1Q4G148 440 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 TRMT12Q53H54 448 aaKnown RBP6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ZNF628Q5EBL2 1059 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 BICRALQ6AI39 1079 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 TMEM81Q6P7N7 255 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 FRMD7Q6ZUT3 714 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 TAGAPQ8N103 731 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 EID3Q8N140 333 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 GBP7Q8N8V2 638 aaPredicted RBP6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ADCY4Q8NFM4 1077 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 OR5M3Q8NGP4 307 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 LILRB4Q8NHJ6 448 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.08□□□□□ -1.44
TMEM116-208ENST00000549537 METTL6Q8TCB7 284 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ZNF675Q8TD23 568 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 HGDQ93099 445 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 SDCCAG3Q96C92 435 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 KLHL29Q96CT2 875 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 SMC6Q96SB8 1091 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 SECISBP2Q96T21 854 aaKnown RBP6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ANGPTL4Q9BY76 406 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ENKD1Q9H0I2 346 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 NXF5Q9H1B4 397 aaKnown RBP6.08□□□□□ -1.44
TMEM116-208ENST00000549537 UBQLN3Q9H347 655 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 C12orf65Q9H3J6 166 aaKnown RBP6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ANKZF1Q9H8Y5 726 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ACKR4Q9NPB9 350 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 C14orf119Q9NWQ9 140 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 NMRK1Q9NWW6 199 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 QPCTLQ9NXS2 382 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 TNFRSF10DQ9UBN6 386 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 TMCC3Q9ULS5 477 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 BOKQ9UMX3 212 aaPredicted RBP6.08□□□□□ -1.44
TMEM116-208ENST00000549537 RNF6Q9Y252 685 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 DLGAP4Q9Y2H0 992 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 STK38LQ9Y2H1 464 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 PLLPQ9Y342 182 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 CCL27Q9Y4X3 112 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 TIMM22Q9Y584 194 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 FAM215AQ9Y5M1 114 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 DNAJC13O75165 2243 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 FBN3Q75N90 2809 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 ACANP16112 2415 aa6.08□□□□□ -1.44
TMEM116-208ENST00000549537 HRNRQ86YZ3 2850 aaPredicted RBP6.07□□□□□ -1.44
TMEM116-208ENST00000549537 CAPN14A8MX76 684 aa6.07□□□□□ -1.44
TMEM116-208ENST00000549537 NPIPB8E9PQR5 432 aa6.07□□□□□ -1.44
TMEM116-208ENST00000549537 TO15178 435 aa6.07□□□□□ -1.44
TMEM116-208ENST00000549537 ERAL1O75616 437 aaKnown RBP6.07□□□□□ -1.44
TMEM116-208ENST00000549537 PPM1BO75688 479 aa6.07□□□□□ -1.44
TMEM116-208ENST00000549537 TOXO94900 526 aa6.07□□□□□ -1.44
TMEM116-208ENST00000549537 ABCB1P08183 1280 aaPredicted RBP6.07□□□□□ -1.44
TMEM116-208ENST00000549537 CT45A8P0DMV1 189 aa6.07□□□□□ -1.44
TMEM116-208ENST00000549537 CT45A9P0DMV2 189 aa6.07□□□□□ -1.44
TMEM116-208ENST00000549537 GLI4P10075 376 aa6.07□□□□□ -1.44
TMEM116-208ENST00000549537 MYL2P10916 166 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms