RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 SH2D4BQ5SQS7 431 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 EEF1A1P5Q5VTE0 462 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 ARSKQ6UWY0 536 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 SEM1Q6ZVN7 128 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 LIX1LQ8IVB5 337 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 TRIM42Q8IWZ5 723 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 MREGQ8N565 214 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 NATD1Q8N6N6 113 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 TNIP2Q8NFZ5 429 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 OR4N2Q8NGD1 307 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 RNF138Q8WVD3 245 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 TWIST2Q8WVJ9 160 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 EFHD2Q96C19 240 aaPredicted RBP10.36□□□□□ -0.75
BEST3-209ENST00000548658 FCRL1Q96LA6 429 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 ZFP3Q96NJ6 502 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 TRIB1Q96RU8 372 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 TM9SF2Q99805 663 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 LMF2Q9BU23 707 aaKnown RBP10.36□□□□□ -0.75
BEST3-209ENST00000548658 TUBB1Q9H4B7 451 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 PTGES2Q9H7Z7 377 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 FAM120CQ9NX05 1096 aaKnown RBP10.36□□□□□ -0.75
BEST3-209ENST00000548658 SH3BP4Q9P0V3 963 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 PPP4R1LQ9P1A2 415 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 ABCA12Q86UK0 2595 aa10.36□□□□□ -0.75
BEST3-209ENST00000548658 MBD3L4A6NDZ8 208 aaPredicted RBP10.35□□□□□ -0.75
BEST3-209ENST00000548658 MBD3L3A6NE82 208 aaPredicted RBP10.35□□□□□ -0.75
BEST3-209ENST00000548658 MBD3L5A6NJ08 208 aaPredicted RBP10.35□□□□□ -0.75
BEST3-209ENST00000548658 SPAG7O75391 227 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 LYPLA1O75608 230 aaPredicted RBP10.35□□□□□ -0.75
BEST3-209ENST00000548658 SOX30O94993 753 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 IL33O95760 270 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 IL18BPO95998 194 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 CHRNGP07510 517 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 SDC1P18827 310 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 CTSSP25774 331 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 DPP4P27487 766 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 ASCL1P50553 236 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 GFRA1P56159 465 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 DSCR4P56555 118 aaPredicted RBP10.35□□□□□ -0.75
BEST3-209ENST00000548658 HSPB3Q12988 150 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 GANABQ14697 944 aaKnown RBP10.35□□□□□ -0.75
BEST3-209ENST00000548658 BCL2A1Q16548 175 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 PRSS53Q2L4Q9 553 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 UGT3A2Q3SY77 523 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 FBXL19-AS1Q494R0 122 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 GALNTL6Q49A17 601 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 ATP6AP1LQ52LC2 224 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 ZCCHC12Q6PEW1 402 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 CROCCP2Q86T23 111 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 KIF18BQ86Y91 864 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 CDRT4Q8N9R6 151 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 OR4K17Q8NGC6 315 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 OR2T11Q8NH01 316 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 GOT1L1Q8NHS2 421 aaPredicted RBP10.35□□□□□ -0.75
BEST3-209ENST00000548658 MBD3L2Q8NHZ7 208 aaPredicted RBP10.35□□□□□ -0.75
BEST3-209ENST00000548658 GFM2Q969S9 779 aaKnown RBP10.35□□□□□ -0.75
BEST3-209ENST00000548658 SFXN2Q96NB2 322 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 TSSK3Q96PN8 268 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 UCN2Q96RP3 112 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 PRPF18Q99633 342 aaKnown RBP10.35□□□□□ -0.75
BEST3-209ENST00000548658 NTMQ9P121 344 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 SLC17A7Q9P2U7 560 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 DKKL1Q9UK85 242 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 PTGDR2Q9Y5Y4 395 aa10.35□□□□□ -0.75
BEST3-209ENST00000548658 LRBAP50851 2863 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 H0Y3Z8 333 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 PIP5K1BO14986 540 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 RGS16O15492 202 aaPredicted RBP10.34□□□□□ -0.75
BEST3-209ENST00000548658 AKAP10O43572 662 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 ZNF500O60304 480 aaPredicted RBP10.34□□□□□ -0.75
BEST3-209ENST00000548658 FADS1O60427 444 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 NME6O75414 186 aaPredicted RBP10.34□□□□□ -0.75
BEST3-209ENST00000548658 SNUPNO95149 360 aaKnown RBP10.34□□□□□ -0.75
BEST3-209ENST00000548658 ZWINTO95229 277 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 HSPA4LO95757 839 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 BPGMP07738 259 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 BCKDHAP12694 445 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 LCN1P31025 176 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 UQCRC1P31930 480 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 GABRA3P34903 492 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 HPCAL1P37235 193 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 FRKP42685 505 aaPredicted RBP10.34□□□□□ -0.75
BEST3-209ENST00000548658 KIR2DL3P43628 341 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 DGKQP52824 942 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 GAS1P54826 345 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 EEFSECP57772 596 aaKnown RBP10.34□□□□□ -0.75
BEST3-209ENST00000548658 PRR5P85299 388 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 C17orf67Q0P5P2 114 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 PDE7AQ13946 482 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 MLC1Q15049 377 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 OR5M10Q6IEU7 315 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 CHMP1BQ7LBR1 199 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 ZNF551Q7Z340 670 aaPredicted RBP10.34□□□□□ -0.75
BEST3-209ENST00000548658 KIRREL3Q8IZU9 778 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 PPP1R14CQ8TAE6 165 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 GPR151Q8TDV0 419 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 HOXB13Q92826 284 aaPredicted RBP10.34□□□□□ -0.75
BEST3-209ENST00000548658 RNASE6Q93091 150 aaKnown RBP10.34□□□□□ -0.75
BEST3-209ENST00000548658 WNT2BQ93097 391 aa10.34□□□□□ -0.75
BEST3-209ENST00000548658 MECRQ9BV79 373 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms