RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 HHIPQ96QV1 700 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 SGPP1Q9BX95 441 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 SLC25A19Q9HC21 320 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 KLHL18O94889 574 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 HLA-DPB1P04440 258 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 SRPRAP08240 638 aaKnown RBP12.19□□□□□ -0.46
BRF1-210ENST00000547374 PYCR1P32322 319 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 IFNGR2P38484 337 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 KHKP50053 298 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 TAS2R38P59533 333 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 SERPINA12Q8IW75 414 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 SLC16A11Q8NCK7 471 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 FCRL1Q96LA6 429 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 SPATA5L1Q9BVQ7 753 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 TAPBPLQ9BX59 468 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 NXF2Q9GZY0 626 aaKnown RBP12.19□□□□□ -0.46
BRF1-210ENST00000547374 B3GAT2Q9NPZ5 323 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 SLC7A7Q9UM01 511 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 MAU2Q9Y6X3 613 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 A0A0B4J293 547 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 FAM171A2A8MVW0 826 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 TRHRP34981 398 aaPredicted RBP12.19□□□□□ -0.46
BRF1-210ENST00000547374 NAA10P41227 235 aaPredicted RBP12.19□□□□□ -0.46
BRF1-210ENST00000547374 HMGA2P52926 109 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 LRRC17Q8N6Y2 441 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 ACOT4Q8N9L9 421 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 SUN5Q8TC36 379 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 ZNF296Q8WUU4 475 aaPredicted RBP12.19□□□□□ -0.46
BRF1-210ENST00000547374 CLIP3Q96DZ5 547 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 LRRC3BQ96PB8 259 aa12.19□□□□□ -0.46
BRF1-210ENST00000547374 SIRT3Q9NTG7 399 aaPredicted RBP12.19□□□□□ -0.46
BRF1-210ENST00000547374 A0A1W2PP55 124 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 SMAD9O15198 467 aaKnown RBP12.18□□□□□ -0.46
BRF1-210ENST00000547374 AKAP8O43823 692 aaKnown RBP12.18□□□□□ -0.46
BRF1-210ENST00000547374 ASGR2P07307 311 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 CLUP10909 449 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 SNRPGP62308 76 aaKnown RBP12.18□□□□□ -0.46
BRF1-210ENST00000547374 PLK5Q496M5 336 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 ENTPD8Q5MY95 495 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 CDC73Q6P1J9 531 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 MZT2AQ6P582 158 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 ZNF793Q6ZN11 406 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 CEACAM19Q7Z692 300 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 RASSF5Q8WWW0 418 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 TRIM63Q969Q1 353 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 SNX18Q96RF0 628 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 ZNF717Q9BY31 904 aaPredicted RBP12.18□□□□□ -0.46
BRF1-210ENST00000547374 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.18□□□□□ -0.46
BRF1-210ENST00000547374 RASD1Q9Y272 281 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 RTTNQ86VV8 2226 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 NOS1APO75052 506 aaPredicted RBP12.18□□□□□ -0.46
BRF1-210ENST00000547374 SOX30O94993 753 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 IL1AP01583 271 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 CSNK2A2P19784 350 aaPredicted RBP12.18□□□□□ -0.46
BRF1-210ENST00000547374 GALK2Q01415 458 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 EFR3AQ14156 821 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 C2orf27AQ580R0 203 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 CAMKMTQ7Z624 323 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 OR14C36Q8NHC7 312 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 GOT1L1Q8NHS2 421 aaPredicted RBP12.18□□□□□ -0.46
BRF1-210ENST00000547374 CCDC120Q96HB5 630 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 MRGPRX3Q96LB0 322 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 IGFLR1Q9H665 355 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 DIMT1Q9UNQ2 313 aaKnown RBP12.18□□□□□ -0.46
BRF1-210ENST00000547374 PPIL1Q9Y3C6 166 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 TRAV27A0A087WT01 109 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 SHISA3A0PJX4 238 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 NPIPB8E9PQR5 432 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 LIMS3P0CW19 117 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 LIMS4P0CW20 117 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 CTSAP10619 480 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 ACP2P11117 423 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 ELK1P19419 428 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 ETV6P41212 452 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 FAPQ12884 760 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 PDE7AQ13946 482 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 DSG2Q14126 1118 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 FGFBP1Q14512 234 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.18□□□□□ -0.46
BRF1-210ENST00000547374 GXYLT1Q4G148 440 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 TMEM31Q5JXX7 168 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 SFRP4Q6FHJ7 346 aaPredicted RBP12.18□□□□□ -0.46
BRF1-210ENST00000547374 GDPD1Q8N9F7 314 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 TMEM163Q8TC26 289 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 CDS1Q92903 461 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 VOPP1Q96AW1 172 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 UPRTQ96BW1 309 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 CNRIP1Q96F85 164 aaPredicted RBP12.18□□□□□ -0.46
BRF1-210ENST00000547374 SLC6A17Q9H1V8 727 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 MBNL1Q9NR56 388 aaKnown RBP12.18□□□□□ -0.46
BRF1-210ENST00000547374 STMN3Q9NZ72 180 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 CA5BQ9Y2D0 317 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 WDR45Q9Y484 360 aa12.18□□□□□ -0.46
BRF1-210ENST00000547374 A0A1W2PR48 441 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 OTOL1A6NHN0 477 aaPredicted RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 MID1O15344 667 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 FABP7O15540 132 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 UBXN7O94888 489 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 DDOSTP39656 456 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms