RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TVP23BQ9NYZ1 205 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 NDRG4Q9ULP0 352 aaKnown RBP11.13□□□□□ -0.63
CCDC38-202ENST00000546386 HCN4Q9Y3Q4 1203 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 LRRN3E7EW58 273 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 LRRTM2O43300 516 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 HPRP00739 348 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 STSP08842 583 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF10P21506 573 aaPredicted RBP11.13□□□□□ -0.63
CCDC38-202ENST00000546386 PSMB9P28065 219 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 MGAT2Q10469 447 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 DOC2BQ14184 412 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 MAD2L1BPQ15013 274 aaPredicted RBP11.13□□□□□ -0.63
CCDC38-202ENST00000546386 ENTPD8Q5MY95 495 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 DCST2Q5T1A1 773 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 PDZK1Q5T2W1 519 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 POMZP3Q6PJE2 187 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 SMARCD3Q6STE5 483 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 CAMKK1Q8N5S9 505 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 ZFPM2Q8WW38 1151 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 C12orf43Q96C57 262 aaKnown RBP11.13□□□□□ -0.63
CCDC38-202ENST00000546386 TCTN2Q96GX1 697 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 MS4A4EQ96PG1 132 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 DPYSL5Q9BPU6 564 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 SPATA9Q9BWV2 254 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 LRRN3Q9H3W5 708 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 ATP13A2Q9NQ11 1180 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 IMPAD1Q9NX62 359 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 CTSFQ9UBX1 484 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 TMCC3Q9ULS5 477 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 SLC7A7Q9UM01 511 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 CLCA3PQ9Y6N3 262 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 SPACA6W5XKT8 324 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 ATMQ13315 3056 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 A0A087WUU8 490 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 TOR1BO14657 336 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF749O43361 778 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 DNAJB5O75953 348 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 MT-ND2P03891 347 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 CCNYL3P0C7X3 344 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 ITGA2P17301 1181 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 CBLP22681 906 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 PSG6Q00889 435 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 MRPL2Q5T653 305 aaKnown RBP11.12□□□□□ -0.63
CCDC38-202ENST00000546386 BHLHB9Q6PI77 547 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF836Q6ZNA1 936 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 LANCL3Q6ZV70 420 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF605Q86T29 641 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 OR4C3Q8NH37 302 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 SMAP2Q8WU79 429 aaPredicted RBP11.12□□□□□ -0.63
CCDC38-202ENST00000546386 RPL3LQ92901 407 aaKnown RBP11.12□□□□□ -0.63
CCDC38-202ENST00000546386 ISOC1Q96CN7 298 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 NODALQ96S42 347 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 POLR2J3Q9H1A7 115 aaKnown RBP11.12□□□□□ -0.63
CCDC38-202ENST00000546386 PRTFDC1Q9NRG1 225 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 MS4A12Q9NXJ0 267 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF226Q9NYT6 803 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 COMMD3-BMI1R4GMX3 469 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 PCNX3Q9H6A9 2034 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 TEX51A0A1B0GUA7 166 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 A0A1B0GVG6 124 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 MASP2O00187 686 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 TBX19O60806 448 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 LGI1O95970 557 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF182P17025 639 aaPredicted RBP11.12□□□□□ -0.63
CCDC38-202ENST00000546386 TCEA1P23193 301 aaKnown RBP11.12□□□□□ -0.63
CCDC38-202ENST00000546386 STT3AP46977 705 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 MLC1Q15049 377 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 ARHGEF39Q8N4T4 335 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF347Q96SE7 839 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 SLC7A5P2Q9GIP4 190 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 ENKD1Q9H0I2 346 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 RNF167Q9H6Y7 350 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 FGF21Q9NSA1 209 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 C20orf141Q9NUB4 165 aa11.12□□□□□ -0.63
CCDC38-202ENST00000546386 SLC16A6O15403 523 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 LAMTOR5O43504 91 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 UGT2B11O75310 529 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 CKMT1AP12532 417 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 CCNA2P20248 432 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 ARRB1P49407 418 aaPredicted RBP11.11□□□□□ -0.63
CCDC38-202ENST00000546386 EMDP50402 254 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 ESRRGP62508 458 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 PRTGQ2VWP7 1150 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 KCTD21Q4G0X4 260 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 WDR45BQ5MNZ6 344 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 SLC35F1Q5T1Q4 408 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 OR5M10Q6IEU7 315 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 PGBD2Q6P3X8 592 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 FAM199XQ6PEV8 388 aaPredicted RBP11.11□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF730Q6ZMV8 503 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 WDR88Q6ZMY6 472 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 NRMQ8IXM6 262 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 MAML2Q8IZL2 1156 aaPredicted RBP11.11□□□□□ -0.63
CCDC38-202ENST00000546386 TCEANCQ8N8B7 351 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 PFN4Q8NHR9 129 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 DNASE2BQ8WZ79 361 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 CNOT9Q92600 299 aaKnown RBP11.11□□□□□ -0.63
CCDC38-202ENST00000546386 MCHR1Q99705 422 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 THSD1Q9NS62 852 aa11.11□□□□□ -0.63
CCDC38-202ENST00000546386 CUTCQ9NTM9 273 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms