RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 VSNL1P62760 191 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 RPP38P78345 283 aaKnown RBP7.04□□□□□ -1.28
SNHG1-223ENST00000545440 RAE1P78406 368 aaKnown RBP7.04□□□□□ -1.28
SNHG1-223ENST00000545440 HMGCS1Q01581 520 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 SLC18A2Q05940 514 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF763Q0D2J5 394 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 MGAT2Q10469 447 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 FAPQ12884 760 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 HEPACAMQ14CZ8 416 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 CEBPEQ15744 281 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF628Q5EBL2 1059 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 CFAP157Q5JU67 520 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 PRAMEF20Q5VT98 475 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 EMBQ6PCB8 327 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 RNF165Q6ZSG1 346 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 TRILQ7L0X0 811 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 TICAM1Q8IUC6 712 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 CCDC63Q8NA47 563 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 DOK4Q8TEW6 326 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 AENQ8WTP8 325 aaKnown RBP7.04□□□□□ -1.28
SNHG1-223ENST00000545440 APIPQ96GX9 242 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 METTL2AQ96IZ6 378 aaKnown RBP7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF597Q96LX8 424 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF681Q96N22 645 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 SMC6Q96SB8 1091 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 TRMOQ9BU70 441 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 DOHHQ9BU89 302 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 IQCGQ9H095 443 aaKnown RBP7.04□□□□□ -1.28
SNHG1-223ENST00000545440 CHST11Q9NPF2 352 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 GIMAP4Q9NUV9 329 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 C19orf73Q9NVV2 129 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 QPCTLQ9NXS2 382 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 HEY2Q9UBP5 337 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 B4GALT7Q9UBV7 327 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 PRODH2Q9UF12 536 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 LGALS13Q9UHV8 139 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF639Q9UID6 485 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 FBXL7Q9UJT9 491 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 CNOT11Q9UKZ1 510 aaKnown RBP7.04□□□□□ -1.28
SNHG1-223ENST00000545440 DLGAP4Q9Y2H0 992 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 TIMM22Q9Y584 194 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 LIPGQ9Y5X9 500 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ATP23Q9Y6H3 246 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF780BQ9Y6R6 833 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.04□□□□□ -1.28
SNHG1-223ENST00000545440 CELSR2Q9HCU4 2923 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ABCA12Q86UK0 2595 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 CREBBPQ92793 2442 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 FOXO6A8MYZ6 492 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 NPIPB8E9PQR5 432 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 ZNHIT1O43257 154 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 HCN1O60741 890 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 TRIM3O75382 744 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-223ENST00000545440 BCAS2O75934 225 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-223ENST00000545440 CLDN14O95500 239 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 GLI4P10075 376 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 UROSP10746 265 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 CPA3P15088 417 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 NAGAP17050 411 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 DDCP20711 480 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 PRPH2P23942 346 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 HTR1EP28566 365 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 PTGER4P35408 488 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 FEN1P39748 380 aaKnown RBP7.03□□□□□ -1.28
SNHG1-223ENST00000545440 NAGLUP54802 743 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 FBXW4P57775 412 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 ERVFRD-1P60508 538 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 DCAF7P61962 342 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 PSPHP78330 225 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 DUSP2Q05923 314 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 DUSP8Q13202 625 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 PCLAFQ15004 111 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 IMPG1Q17R60 797 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 TMEM211Q6ICI0 200 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 WDR93Q6P2C0 686 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 TMEM81Q6P7N7 255 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 IKBIPQ70UQ0 350 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 TRABD2AQ86V40 505 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 C4orf33Q8N1A6 199 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 MARVELD2Q8N4S9 558 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 FAM76AQ8TAV0 307 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 SPPL2AQ8TCT8 520 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 C16orf78Q8WTQ4 265 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 CAVIN3Q969G5 261 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 SARAFQ96BY9 339 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 HSPBAP1Q96EW2 488 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 BTBD9Q96Q07 612 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 EBPLQ9BY08 206 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 ITPAQ9BY32 194 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 NXF5Q9H1B4 397 aaKnown RBP7.03□□□□□ -1.28
SNHG1-223ENST00000545440 DEFB127Q9H1M4 99 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 PROK2Q9HC23 129 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 ACKR4Q9NPB9 350 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 MYNNQ9NPC7 610 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 RRAGDQ9NQL2 400 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-223ENST00000545440 FAM53CQ9NYF3 392 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 COQ3Q9NZJ6 369 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 DTX4Q9Y2E6 619 aa7.03□□□□□ -1.28
SNHG1-223ENST00000545440 WBP11Q9Y2W2 641 aaKnown RBP7.03□□□□□ -1.28
SNHG1-223ENST00000545440 PLLPQ9Y342 182 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms