RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 HS3ST1O14792 307 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 SCO2O43819 266 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 FADS1O60427 444 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 TMCC2O75069 709 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 ALDOAP04075 364 aaKnown RBP15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 STX2P32856 288 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 EVI2BP34910 448 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 MAGEA4P43358 317 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 EEFSECP57772 596 aaKnown RBP15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 DMTNQ08495 405 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 STAC2Q6ZMT1 411 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 C1orf52Q8N6N3 182 aaKnown RBP15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 METTL25Q8N6Q8 603 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 OR9A2Q8NGT5 310 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 ELOVL6Q9H5J4 265 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 FLRT3Q9NZU0 649 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 MED11Q9P086 117 aa15.99■□□□□ 0.15
CLSTN3-214ENST00000542663 RNF212BA8MTL3 300 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 BCAS2O75934 225 aaPredicted RBP15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 KRT20P35900 424 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 TRA2BP62995 288 aaKnown RBP15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 PSG6Q00889 435 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 CLEC12BQ2HXU8 276 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 HMBOX1Q6NT76 420 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 LETMD1Q6P1Q0 360 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 KLC3Q6P597 504 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 MILR1Q7Z6M3 343 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 SLC44A2Q8IWA5 706 aaPredicted RBP15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 ERP27Q96DN0 273 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 MRRFQ96E11 262 aaKnown RBP15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 PLPPR2Q96GM1 343 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 HBEGFQ99075 208 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 FAIM2Q9BWQ8 316 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 BRF2Q9HAW0 419 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 PLSCR4Q9NRQ2 329 aa15.98■□□□□ 0.15
CLSTN3-214ENST00000542663 FAM187AA6NFU0 413 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 STX16-NPEPL1H3BU86 382 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 STX16O14662 325 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 RAD51CO43502 376 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 PPP3CBP16298 524 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 PSPHP78330 225 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 OCRLQ01968 901 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 GUCY2DQ02846 1103 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 GANABQ14697 944 aaKnown RBP15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 GGNQ86UU5 652 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 CCDC25Q86WR0 208 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 OR7G2Q8NG99 324 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 FBXO25Q8TCJ0 367 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 SELENOMQ8WWX9 145 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 ZNF225Q9UK10 706 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 LAMP3Q9UQV4 416 aa15.97■□□□□ 0.15
CLSTN3-214ENST00000542663 LINC01387J3KSC0 135 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 OVOL3O00110 214 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 IL3P08700 152 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 TYK2P29597 1187 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 PAFAH1B1P43034 410 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 SLC6A8P48029 635 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 PLTPP55058 493 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 STX5Q13190 355 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 VEZF1Q14119 521 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 TRADDQ15628 312 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 ERCC6LQ2NKX8 1250 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 OR6K3Q8NGY3 331 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 LILRB1Q8NHL6 650 aaPredicted RBP15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 UHMK1Q8TAS1 419 aaKnown RBP15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 AKAP1Q92667 903 aaKnown RBP eCLIP15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 EXOSC8Q96B26 276 aaKnown RBP15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 C1GALT1C1Q96EU7 318 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 REG4Q9BYZ8 158 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 KCNF1Q9H3M0 494 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 PFDN4Q9NQP4 134 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 CLEC4AQ9UMR7 237 aa15.96■□□□□ 0.15
CLSTN3-214ENST00000542663 SHISA8B8ZZ34 492 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 PLOD3O60568 738 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 RPS17P08708 135 aaKnown RBP15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 FCGR2AP12318 317 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 SERPINB8P50452 374 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 RPS3AP61247 264 aaKnown RBP15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 RAE1P78406 368 aaKnown RBP15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 MRPS22P82650 360 aaKnown RBP15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 TMEM44Q2T9K0 475 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 TCHHL1Q5QJ38 904 aaPredicted RBP15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 ZDHHC24Q6UX98 284 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 WFDC8Q8IUA0 241 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 RAB3IL1Q8TBN0 382 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 DUSP19Q8WTR2 217 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 MTBPQ96DY7 904 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 NAPGQ99747 312 aaPredicted RBP15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 STMN4Q9H169 189 aaPredicted RBP15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 VPS11Q9H270 941 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 XPR1Q9UBH6 696 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 MCM8Q9UJA3 840 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 ABCG2Q9UNQ0 655 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 OR10H1Q9Y4A9 318 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 AP4B1Q9Y6B7 739 aa15.95■□□□□ 0.14
CLSTN3-214ENST00000542663 SS18L1O75177 396 aaPredicted RBP15.94■□□□□ 0.14
CLSTN3-214ENST00000542663 ESRRBO95718 433 aa15.94■□□□□ 0.14
CLSTN3-214ENST00000542663 CHN1P15882 459 aa15.94■□□□□ 0.14
CLSTN3-214ENST00000542663 TSPAN8P19075 237 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms