RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SLC29A1Q99808 456 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 MESP1Q9BRJ9 268 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 CNPPD1Q9BV87 410 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 RSPO3Q9BXY4 272 aaPredicted RBP25.77■■□□□ 1.72
CCM2-218ENST00000541586 DUSP22Q9NRW4 184 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 PNO1Q9NRX1 252 aaKnown RBP25.77■■□□□ 1.72
CCM2-218ENST00000541586 ERVK-19Q9WJR5 959 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 TAF4O00268 1085 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 ALOX12BO75342 701 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 SERPINB7O75635 380 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 WT1P19544 449 aaPredicted RBP25.77■■□□□ 1.72
CCM2-218ENST00000541586 CD247P20963 164 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 EMDP50402 254 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 FUT7Q11130 342 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 IL10RAQ13651 578 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 IQCCQ4KMZ1 466 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 ZBTB49Q6ZSB9 765 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 PIWIL3Q7Z3Z3 882 aaKnown RBP25.77■■□□□ 1.72
CCM2-218ENST00000541586 PTPMT1Q8WUK0 201 aaPredicted RBP25.77■■□□□ 1.72
CCM2-218ENST00000541586 STACQ99469 402 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 BTBD2Q9BX70 525 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 SLC38A1Q9H2H9 487 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 CALML5Q9NZT1 146 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 CNOT11Q9UKZ1 510 aaKnown RBP25.77■■□□□ 1.72
CCM2-218ENST00000541586 TCRBV16S1A1N1A0A5B0 115 aa25.76■■□□□ 1.71
CCM2-218ENST00000541586 C17orf105B2RV13 164 aa25.76■■□□□ 1.71
CCM2-218ENST00000541586 PDLIM1O00151 329 aa25.76■■□□□ 1.71
CCM2-218ENST00000541586 SOCS2O14508 198 aa25.76■■□□□ 1.71
CCM2-218ENST00000541586 ETS2P15036 469 aa25.76■■□□□ 1.71
CCM2-218ENST00000541586 ZNF155Q12901 538 aaPredicted RBP25.76■■□□□ 1.71
CCM2-218ENST00000541586 LANCL3Q6ZV70 420 aa25.76■■□□□ 1.71
CCM2-218ENST00000541586 PLPP5Q8NEB5 264 aa25.76■■□□□ 1.71
CCM2-218ENST00000541586 HOXB13Q92826 284 aaPredicted RBP25.76■■□□□ 1.71
CCM2-218ENST00000541586 TMBIM1Q969X1 311 aa25.76■■□□□ 1.71
CCM2-218ENST00000541586 C8orf44Q96CB5 159 aa25.76■■□□□ 1.71
CCM2-218ENST00000541586 VCXQ9H320 206 aa25.76■■□□□ 1.71
CCM2-218ENST00000541586 SEC14L3Q9UDX4 400 aa25.76■■□□□ 1.71
CCM2-218ENST00000541586 HEMK1Q9Y5R4 338 aaPredicted RBP25.76■■□□□ 1.71
CCM2-218ENST00000541586 GNGT2O14610 69 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 ACOX3O15254 700 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 EFSO43281 561 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 OR1E2P47887 323 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 CHRNEQ04844 493 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 ARHGAP11BQ3KRB8 267 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 C7orf57Q8NEG2 295 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 GPR32P1Q8NGA4 272 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 C9orf16Q9BUW7 83 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 FAM117AQ9C073 453 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 FOLH1BQ9HBA9 442 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 BAG5Q9UL15 447 aa25.75■■□□□ 1.71
CCM2-218ENST00000541586 CFAP47Q6ZTR5 3102 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 PRAMEF25A6NGN4 478 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 NKX2-8O15522 239 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 PRAMEF2O60811 474 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 DIRAS1O95057 198 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 ZIC2O95409 532 aaPredicted RBP25.74■■□□□ 1.71
CCM2-218ENST00000541586 PRKAR1AP10644 381 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 ZNF23P17027 643 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 TAF11Q15544 211 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 PPP4R4Q6NUP7 873 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 TSEN54Q7Z6J9 526 aaKnown RBP25.74■■□□□ 1.71
CCM2-218ENST00000541586 CBR4Q8N4T8 237 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 RASSF5Q8WWW0 418 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 GEMIN6Q8WXD5 167 aaKnown RBP25.74■■□□□ 1.71
CCM2-218ENST00000541586 PIK3R3Q92569 461 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 SH3GLB1Q9Y371 365 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 PCDHGB3Q9Y5G1 929 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 CHD8Q9HCK8 2581 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 DSPPQ9NZW4 1301 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 A8MUA0 341 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 FCMRO60667 390 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 FESP07332 822 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 ITPKBP27987 946 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 KCNJ5P48544 419 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 IST1P53990 364 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 HPCAP84074 193 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 NRF1Q16656 503 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 ATP1A1-AS1Q5TC04 95 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 COX18Q8N8Q8 333 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 GPR151Q8TDV0 419 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 VSTM2LQ96N03 204 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 LMF2Q9BU23 707 aaKnown RBP25.74■■□□□ 1.71
CCM2-218ENST00000541586 SPATA5L1Q9BVQ7 753 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 OR10A5Q9H207 317 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 IGF2RP11717 2491 aa25.74■■□□□ 1.71
CCM2-218ENST00000541586 IGHV3-20A0A0C4DH32 117 aa25.73■■□□□ 1.71
CCM2-218ENST00000541586 NKX2-2O95096 273 aa25.73■■□□□ 1.71
CCM2-218ENST00000541586 CLPSP04118 112 aa25.73■■□□□ 1.71
CCM2-218ENST00000541586 MMP11P24347 488 aa25.73■■□□□ 1.71
CCM2-218ENST00000541586 GABRA3P34903 492 aa25.73■■□□□ 1.71
CCM2-218ENST00000541586 ELAVL1Q15717 326 aaKnown RBP25.73■■□□□ 1.71
CCM2-218ENST00000541586 OR2T5Q6IEZ7 315 aa25.73■■□□□ 1.71
CCM2-218ENST00000541586 HMGN2P46Q86SG4 172 aa25.73■■□□□ 1.71
CCM2-218ENST00000541586 ZNF615Q8N8J6 731 aa25.73■■□□□ 1.71
CCM2-218ENST00000541586 CHDHQ8NE62 594 aaPredicted RBP25.73■■□□□ 1.71
CCM2-218ENST00000541586 OR2T29Q8NH02 315 aa25.73■■□□□ 1.71
CCM2-218ENST00000541586 SENP5Q96HI0 755 aaPredicted RBP25.73■■□□□ 1.71
CCM2-218ENST00000541586 SDF2Q99470 211 aa25.73■■□□□ 1.71
CCM2-218ENST00000541586 QRSL1Q9H0R6 528 aaKnown RBP25.73■■□□□ 1.71
CCM2-218ENST00000541586 NDUFAF4Q9P032 175 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms