RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ZNF888P0CJ79 500 aaPredicted RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 HNRNPCL4P0DMR1 293 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 ETS2P15036 469 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 FPR1P21462 350 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 AVPR1BP47901 424 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 PPM1FP49593 454 aaPredicted RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 CRISP3P54108 245 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 ARSFP54793 590 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 ARF3P61204 181 aaPredicted RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 CSNK2BP67870 215 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 HPCAP84074 193 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 MERTKQ12866 999 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 HYAL2Q12891 473 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 TOP3AQ13472 1001 aaPredicted RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 DNASE1L3Q13609 305 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 GRM7Q14831 915 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 NR1D2Q14995 579 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 ZNF385BQ569K4 471 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.79□□□□□ -1.16
CHD4-208ENST00000540960 TMEM214Q6NUQ4 689 aaKnown RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 VN1R4Q7Z5H5 301 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 STK32CQ86UX6 486 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 RNF130Q86XS8 419 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 PTOV1Q86YD1 416 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 MCATQ8IVS2 390 aaKnown RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 C19orf47Q8N9M1 422 aaKnown RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 TTC29Q8NA56 475 aaPredicted RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 PIK3C3Q8NEB9 887 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 TOR1AIP2Q8NFQ8 470 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 OR8K5Q8NH50 307 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 FLVCR1-AS1Q8TAF5 88 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 PNPT1Q8TCS8 783 aaKnown RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 CT55Q8WUE5 264 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 PATE1Q8WXA2 126 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 TFAP2CQ92754 450 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 CIDECQ96AQ7 238 aaPredicted RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 MVB12AQ96EY5 273 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 SLC35G5Q96KT7 338 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 EPYCQ99645 322 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 SMAD5Q99717 465 aaKnown RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 ZPBPQ9BS86 351 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 ULBP3Q9BZM4 244 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 GABARAPL1Q9H0R8 117 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 CHST8Q9H2A9 424 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 SEMA6AQ9H2E6 1030 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 IKZF5Q9H5V7 419 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 EPS8L2Q9H6S3 715 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 ZNF556Q9HAH1 456 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 FANCEQ9HB96 536 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 BCL2L10Q9HD36 194 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 VCX3AQ9NNX9 186 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 LHX9Q9NQ69 397 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 ENAMQ9NRM1 1142 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 FGF21Q9NSA1 209 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 ZCCHC3Q9NUD5 404 aaKnown RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 GIN1Q9NXP7 522 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 KLHL28Q9NXS3 571 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 NTMQ9P121 344 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 OAZ3Q9UMX2 235 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 DAPP1Q9UN19 280 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 ZNF232Q9UNY5 417 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 SLC9A8Q9Y2E8 581 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 MYRFQ9Y2G1 1151 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 HSPE1-MOB4S4R3N1 261 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 TLN2Q9Y4G6 2542 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 ARRDC5A6NEK1 342 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 SAC3D1A6NKF1 404 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 POLR1CO15160 346 aaPredicted RBP7.78□□□□□ -1.16
CHD4-208ENST00000540960 GALR3O60755 368 aaPredicted RBP7.78□□□□□ -1.16
CHD4-208ENST00000540960 COQ9O75208 318 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 ERAL1O75616 437 aaKnown RBP7.78□□□□□ -1.16
CHD4-208ENST00000540960 KLHL18O94889 574 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 AIFM1O95831 613 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 C9P02748 559 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 HEXAP06865 529 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 LYNP07948 512 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 GUSBP08236 651 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 MSL3P1P0C860 447 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 NR2F1P10589 423 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 THRBP10828 461 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 RNH1P13489 461 aaKnown RBP7.78□□□□□ -1.16
CHD4-208ENST00000540960 ANXA8P13928 327 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 PORP16435 677 aaPredicted RBP7.78□□□□□ -1.16
CHD4-208ENST00000540960 RHCEP18577 417 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 MATN1P21941 496 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 RRM2P31350 389 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 GALNSP34059 522 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 CAPGP40121 348 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 MEOX1P50221 254 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 XKP51811 444 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 RAB38P57729 211 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 RAB8AP61006 207 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 TUBA4AP68366 448 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 PSPHP78330 225 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 HSPB3Q12988 150 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 GAB1Q13480 694 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 NRF1Q16656 503 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 NHSL2Q5HYW2 709 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 FCRL6Q6DN72 434 aa7.78□□□□□ -1.16
CHD4-208ENST00000540960 TMEM71Q6P5X7 295 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms