RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PSMA8Q8TAA3 256 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 ACTRT2Q8TDY3 377 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 RELTQ969Z4 430 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 TESCQ96BS2 214 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 GIMAP5Q96F15 307 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 TMEM41AQ96HV5 264 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 MAELQ96JY0 434 aaKnown RBP8.44□□□□□ -1.06
SNHG1-215ENST00000540904 OR52B2Q96RD2 323 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 TNFRSF10DQ9UBN6 386 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 PCDHGB4Q9UN71 923 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 FAF1Q9UNN5 650 aaPredicted RBP8.44□□□□□ -1.06
SNHG1-215ENST00000540904 C15orf41Q9Y2V0 281 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 GPR45Q9Y5Y3 372 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 MYO18BQ8IUG5 2567 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 RP1L1Q8IWN7 2480 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-215ENST00000540904 CROCCQ5TZA2 2017 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 A1L4Q6 167 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 WIPF3A6NGB9 483 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 UBDO15205 165 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 SCO2O43819 266 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 SUSD5O60279 629 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 ZG16O60844 167 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 NKX2-2O95096 273 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 IL33O95760 270 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 IGKV1D-16P01601 117 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 IGHG3P01860 377 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 ALOX5P09917 674 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 ACP2P11117 423 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 ESRRAP11474 423 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-215ENST00000540904 IDO1P14902 403 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 ELAVL4P26378 380 aaKnown RBP8.43□□□□□ -1.06
SNHG1-215ENST00000540904 IL12AP29459 219 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 EVI2BP34910 448 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 MAP3K8P41279 467 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 MAN2A2P49641 1150 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 DGKQP52824 942 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 PSMD4P55036 377 aaKnown RBP8.43□□□□□ -1.06
SNHG1-215ENST00000540904 PHC1P78364 1004 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 DPY19L1Q2PZI1 675 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 CCNJQ5T5M9 372 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 ANXA8L1Q5VT79 327 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 TIGD3Q6B0B8 471 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 OR5M10Q6IEU7 315 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 TMEM81Q6P7N7 255 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 ZCCHC12Q6PEW1 402 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 BHLHB9Q6PI77 547 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 FIGNL1Q6PIW4 674 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 EPGNQ6UW88 154 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 ACAD11Q709F0 780 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 DOLPP1Q86YN1 238 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 CLEC4FQ8N1N0 589 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 COX18Q8N8Q8 333 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 OR56A1Q8NGH5 318 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 OR5M9Q8NGP3 310 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 NEIL3Q8TAT5 605 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 FAM57AQ8TBR7 257 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 CKAP2Q8WWK9 683 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 HOXB13Q92826 284 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-215ENST00000540904 MAGEB18Q96M61 343 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 ZBTB18Q99592 522 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 SLC6A15Q9H2J7 730 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 ACKR4Q9NPB9 350 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 SERHLQ9NQF3 203 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 QPCTLQ9NXS2 382 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 FLRT3Q9NZU0 649 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 SUCOQ9UBS9 1254 aaKnown RBP8.43□□□□□ -1.06
SNHG1-215ENST00000540904 ACAD8Q9UKU7 415 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 HRH3Q9Y5N1 445 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 WIF1Q9Y5W5 379 aa8.43□□□□□ -1.06
SNHG1-215ENST00000540904 SVILO95425 2214 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 RNF103-CHMP3A0A140T963 221 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 A0A1B0GVC2 190 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 PRSS51A0A1B0GVH4 220 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 OR14I1A6ND48 311 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 C17orf51A8MQB3 221 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 AQP7O14520 342 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 HCN1O60741 890 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 SCN2BO60939 215 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 SLC22A3O75751 556 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 KCNK2O95069 426 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 UTS2O95399 124 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 TGDSO95455 350 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 CPSF4O95639 269 aaKnown RBP8.42□□□□□ -1.06
SNHG1-215ENST00000540904 PGRP06401 933 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 ENDOUP21128 410 aaKnown RBP8.42□□□□□ -1.06
SNHG1-215ENST00000540904 PTPN6P29350 595 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 IDH3AP50213 366 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 AQP5P55064 265 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 RPS26P62854 115 aaKnown RBP8.42□□□□□ -1.06
SNHG1-215ENST00000540904 STX5Q13190 355 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 GSTA3Q16772 222 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 GXYLT1Q4G148 440 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 PDCD4Q53EL6 469 aaKnown RBP8.42□□□□□ -1.06
SNHG1-215ENST00000540904 HSP90B2PQ58FF3 399 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 CDC73Q6P1J9 531 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 ZNF585AQ6P3V2 769 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 NCCRP1Q6ZVX7 275 aaPredicted RBP8.42□□□□□ -1.06
SNHG1-215ENST00000540904 PLCZ1Q86YW0 608 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 WDSUB1Q8N9V3 476 aa8.42□□□□□ -1.06
SNHG1-215ENST00000540904 OR4C3Q8NH37 302 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms