RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MAD2L1BPQ15013 274 aaPredicted RBP20.87■□□□□ 0.93
HOMER3-204ENST00000539827 MFSD4BQ5TF39 518 aa20.87■□□□□ 0.93
HOMER3-204ENST00000539827 C1orf189Q5VU69 101 aa20.87■□□□□ 0.93
HOMER3-204ENST00000539827 PTCHD1Q96NR3 888 aa20.87■□□□□ 0.93
HOMER3-204ENST00000539827 FGF21Q9NSA1 209 aa20.87■□□□□ 0.93
HOMER3-204ENST00000539827 MAN2C1Q9NTJ4 1040 aa20.87■□□□□ 0.93
HOMER3-204ENST00000539827 HEMK1Q9Y5R4 338 aaPredicted RBP20.87■□□□□ 0.93
HOMER3-204ENST00000539827 A0A1W2PQM1 296 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 SH3PXD2BA1X283 911 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 AGAP5A6NIR3 686 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 XPNPEP2O43895 674 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 OXSR1O95747 527 aaPredicted RBP20.86■□□□□ 0.93
HOMER3-204ENST00000539827 GGT2P36268 569 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 TAS2R41P59536 307 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 LARS2Q15031 903 aaKnown RBP20.86■□□□□ 0.93
HOMER3-204ENST00000539827 LPAL2Q16609 132 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 ZNF773Q6PK81 442 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 B3GNT8Q7Z7M8 397 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 ZAR1Q86SH2 424 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 CNDP2Q96KP4 475 aaKnown RBP20.86■□□□□ 0.93
HOMER3-204ENST00000539827 DPYSL5Q9BPU6 564 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 LMF2Q9BU23 707 aaKnown RBP20.86■□□□□ 0.93
HOMER3-204ENST00000539827 SAP130Q9H0E3 1048 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 ENAMQ9NRM1 1142 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 KCNE5Q9UJ90 142 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 DTX4Q9Y2E6 619 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 A0A1W2PRQ8 180 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 CCDC160A6NGH7 325 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 PEX12O00623 359 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 CCNYL3P0C7X3 344 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 TRHRP34981 398 aaPredicted RBP20.86■□□□□ 0.93
HOMER3-204ENST00000539827 RGS8P57771 180 aaPredicted RBP20.86■□□□□ 0.93
HOMER3-204ENST00000539827 PSG6Q00889 435 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 DGCR6Q14129 220 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 CNPY1Q3B7I2 92 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 PGBD2Q6P3X8 592 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 KCTD8Q6ZWB6 473 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 OR4N2Q8NGD1 307 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 ADAMTS16Q8TE57 1224 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 HOXB13Q92826 284 aaPredicted RBP20.86■□□□□ 0.93
HOMER3-204ENST00000539827 MGAT4BQ9UQ53 548 aa20.86■□□□□ 0.93
HOMER3-204ENST00000539827 ADAMTS20P59510 1910 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 A8MUA0 341 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 H3BSA7 217 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 KCNK2O95069 426 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 AK1P00568 194 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 NUP107P57740 925 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 EEF1A1P68104 462 aaKnown RBP20.85■□□□□ 0.93
HOMER3-204ENST00000539827 ZNHIT3Q15649 155 aaPredicted RBP20.85■□□□□ 0.93
HOMER3-204ENST00000539827 ENTHD1Q8IYW4 607 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 RCBTB1Q8NDN9 531 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 FAM81AQ8TBF8 368 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 MVB12AQ96EY5 273 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 UCK2Q9BZX2 261 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 PNO1Q9NRX1 252 aaKnown RBP20.85■□□□□ 0.93
HOMER3-204ENST00000539827 SEMA4GQ9NTN9 838 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 GMEB2Q9UKD1 530 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 CDC14AQ9UNH5 594 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 RNF6Q9Y252 685 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 LAMA1P25391 3075 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 MUC3AQ02505 3323 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 PTGES3LE9PB15 166 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 DSCR3O14972 297 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 YKT6O15498 198 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 KIAA0513O60268 411 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 ADAP00813 363 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 FBLP22087 321 aaKnown RBP20.85■□□□□ 0.93
HOMER3-204ENST00000539827 UGT2B15P54855 530 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 SH3BGRP55822 239 aaPredicted RBP20.85■□□□□ 0.93
HOMER3-204ENST00000539827 LSM11P83369 360 aaKnown RBP eCLIP20.85■□□□□ 0.93
HOMER3-204ENST00000539827 SERTAD2Q14140 314 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 SMN1Q16637 294 aaKnown RBP20.85■□□□□ 0.93
HOMER3-204ENST00000539827 TRIM61Q5EBN2 209 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 BROXQ5VW32 411 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 FAM181AQ8N9Y4 354 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 TSLPQ969D9 159 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 MCHR1Q99705 422 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 RBM38Q9H0Z9 239 aaKnown RBP20.85■□□□□ 0.93
HOMER3-204ENST00000539827 POLR1BQ9H9Y6 1135 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 ZNF304Q9HCX3 659 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 FBXO4Q9UKT5 387 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 BLOC1S6Q9UL45 172 aa20.85■□□□□ 0.93
HOMER3-204ENST00000539827 AP3D1O14617 1153 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 BRINP1O60477 761 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 NTN1O95631 604 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 DBIP07108 87 aaKnown RBP20.84■□□□□ 0.93
HOMER3-204ENST00000539827 RPS4Y1P22090 263 aaKnown RBP20.84■□□□□ 0.93
HOMER3-204ENST00000539827 POU1F1P28069 291 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 MINDY4Q4G0A6 757 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 ENTPD8Q5MY95 495 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 TMEM236Q5W0B7 351 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 PARP8Q8N3A8 854 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 VSTM2LQ96N03 204 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 OR10A5Q9H207 317 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 LRRN3Q9H3W5 708 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 FANCEQ9HB96 536 aa20.84■□□□□ 0.93
HOMER3-204ENST00000539827 PAK1IP1Q9NWT1 392 aaPredicted RBP20.84■□□□□ 0.93
HOMER3-204ENST00000539827 CPNE6O95741 557 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 THBS1P07996 1170 aa20.83■□□□□ 0.93
HOMER3-204ENST00000539827 IGFBP1P08833 259 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms