RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 BEST3Q8N1M1 668 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.14□□□□□ -1.43
LSAMP-207ENST00000539563 GDPD1Q8N9F7 314 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM174Q8WUU8 243 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 HDHD5Q9BXW7 423 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 RGCCQ9H4X1 137 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 SMCO3A2RU48 225 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 TRIM64BA6NI03 449 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 CNMDO75829 334 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 PYCR1P32322 319 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 CNR2P34972 360 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF252P-AS1Q0IIN9 211 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 NNATQ16517 81 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 ANKK1Q8NFD2 765 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 MSLNLQ96KJ4 702 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 BOCQ9BWV1 1114 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 TXLNGYQ9BZA5 131 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 GORASP2Q9H8Y8 452 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF226Q9NYT6 803 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 PCP4L1A6NKN8 68 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 C1orf105O95561 183 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 MAGEA6P43360 314 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 MRPS21P82921 87 aaKnown RBP6.14□□□□□ -1.43
LSAMP-207ENST00000539563 MPP2Q14168 576 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 PTPRRQ15256 657 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 COL28A1Q2UY09 1125 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 AWAT2Q6E213 333 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 KLHL15Q96M94 604 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 IL26Q9NPH9 171 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 SDR39U1Q9NRG7 319 aaPredicted RBP6.14□□□□□ -1.43
LSAMP-207ENST00000539563 A0A1W2PPK0 400 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 hCG_1807616A0A1W2PRN6 198 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 CENPBD1B2RD01 187 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 ANKRD28O15084 1053 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 HTR2AP28223 471 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 VIPR2P41587 438 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 NR0B1P51843 470 aaKnown RBP6.14□□□□□ -1.43
LSAMP-207ENST00000539563 SLC7A9P82251 487 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM151BQ8IW70 566 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 CASD1Q96PB1 797 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 CDC6Q99741 560 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 CWH43Q9H720 699 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 ABRACLQ9P1F3 81 aa6.14□□□□□ -1.43
LSAMP-207ENST00000539563 FAM227AF5H4B4 570 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 PPP1R3DO95685 299 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LRP8Q14114 963 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM53Q6P2H8 277 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 KDELC1Q6UW63 502 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 OR14L1PQ8NHC6 308 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 NETO1Q8TDF5 533 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 PTERQ96BW5 349 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 PHB2Q99623 299 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 TREX2Q9BQ50 279 aaPredicted RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 PCDHGA7Q9Y5G6 932 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 ST14Q9Y5Y6 855 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SLX4Q8IY92 1834 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 MYOCOSA0A1B0GUC4 107 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 RTCAO00442 366 aaKnown RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 CD97P48960 835 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 NAGSQ8N159 534 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SLC39A11Q8N1S5 342 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 VWA5B2Q8N398 1253 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SYT14Q8NB59 555 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 OR9A4Q8NGU2 314 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 ADAMTS16Q8TE57 1224 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SAMD8Q96LT4 415 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LMF2Q9BU23 707 aaKnown RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SYT4Q9H2B2 425 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 CARD8Q9Y2G2 431 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 KIAA1217Q5T5P2 1943 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 TRPM3Q9HCF6 1732 aaPredicted RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 ZCWPW2A0A1B0GU75 182 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LOC102725191A0A1B0GVB3 256 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 F5H0A9 414 aaPredicted RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SYT7O43581 403 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 UQCRC1P31930 480 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 APLNRP35414 380 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 CDKN2CP42773 168 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LSSP48449 732 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 WNT4P56705 351 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 PSPHP78330 225 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 S100A12P80511 92 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 USP53Q70EK8 1073 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 SLC35F2Q8IXU6 374 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 OR5W2Q8NH69 310 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 C17orf50Q8WW18 174 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM40Q8WWA1 233 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 MAFIPQ8WZ33 124 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM68Q96MH6 324 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 DPH2Q9BQC3 489 aaPredicted RBP6.13□□□□□ -1.43
LSAMP-207ENST00000539563 ALG8Q9BVK2 526 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM185BQ9H7F4 350 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF442Q9H7R0 627 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 IL17CQ9P0M4 197 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LOC285095A0A1B0GVY8 99 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 NME4O00746 187 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 AXIN1O15169 862 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 LAMP1P11279 417 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 NPR2P20594 1047 aa6.13□□□□□ -1.43
LSAMP-207ENST00000539563 CAPN3P20807 821 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms