RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 MAS1P04201 325 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 GPR89BP0CG08 455 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 NR2C1P13056 603 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 ALKAL1Q6UXT8 129 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 RNF111Q6ZNA4 994 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 ACTRT3Q9BYD9 372 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 CPEB1Q9BZB8 566 aaKnown RBP13.75□□□□□ -0.21
CACNB1-206ENST00000539338 GORASP2Q9H8Y8 452 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 ANKRD36CQ5JPF3 1778 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 DNASE1P24855 282 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 MC3RP41968 323 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 MAGEA3P43357 314 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 AFF3P51826 1226 aaKnown RBP13.75□□□□□ -0.21
CACNB1-206ENST00000539338 MAVSQ7Z434 540 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 CLEC14AQ86T13 490 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 OR9A2Q8NGT5 310 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 CCDC32Q9BV29 185 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 DPH1Q9BZG8 443 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 DKKL1Q9UK85 242 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 TBX21Q9UL17 535 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 PLCL2Q9UPR0 1127 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 ADAM12O43184 909 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 CDKL4Q5MAI5 379 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 CARD17Q5XLA6 110 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 TOE1Q96GM8 510 aaKnown RBP13.74□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF700Q9H0M5 742 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 PELI2Q9HAT8 420 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 FAM189A2Q15884 450 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 SFRP4Q6FHJ7 346 aaPredicted RBP13.74□□□□□ -0.21
CACNB1-206ENST00000539338 NADSYN1Q6IA69 706 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 CREB3L4Q8TEY5 395 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 TMEM234Q8WY98 164 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 THRSPQ92748 146 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 MTHFD2LQ9H903 347 aaPredicted RBP13.74□□□□□ -0.21
CACNB1-206ENST00000539338 EPHA6Q9UF33 1036 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 C7orf72A4D263 438 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 JRKO75564 520 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 CA5AP35218 305 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 ACTA2P62736 377 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 ACTG2P63267 376 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 SIGLEC14Q08ET2 396 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 RASGEF1AQ8N9B8 481 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 CYB561A3Q8NBI2 242 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 B3GNT7Q8NFL0 401 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 ZFP90Q8TF47 636 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 GTF2H4Q92759 462 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 MAELQ96JY0 434 aaKnown RBP13.74□□□□□ -0.21
CACNB1-206ENST00000539338 OR4K3Q96R72 315 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 PXNP49023 591 aaPredicted RBP13.74□□□□□ -0.21
CACNB1-206ENST00000539338 POU4F2Q12837 409 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 NKAPLQ5M9Q1 402 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 PGM2L1Q6PCE3 622 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 CPOQ8IVL8 374 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 GALNT11Q8NCW6 608 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 OR5T2Q8NGG2 359 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 PNPLA2Q96AD5 504 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 SLC6A7Q99884 636 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 CLMPQ9H6B4 373 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 SLC7A7Q9UM01 511 aa13.74□□□□□ -0.21
CACNB1-206ENST00000539338 TRAPPC13A5PLN9 417 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 FMO6PO60774 539 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 ATE1O95260 518 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 PPP1R3DO95685 299 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 DDCP20711 480 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 CD38P28907 300 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 HOXA9P31269 272 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF33BQ06732 778 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 EIF5AL1Q6IS14 154 aaKnown RBP13.73□□□□□ -0.21
CACNB1-206ENST00000539338 DPY19L2P1Q6NXN4 242 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 PGBD5Q8N414 524 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 UBXN10Q96LJ8 280 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 CFHR5Q9BXR6 569 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 B3GAT2Q9NPZ5 323 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 MGAT4CQ9UBM8 478 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 CSNK1G3Q9Y6M4 447 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 BTAF1O14981 1849 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 PRKYO43930 277 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 EMX1Q04741 257 aaPredicted RBP13.73□□□□□ -0.21
CACNB1-206ENST00000539338 SGCAQ16586 387 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF584Q8IVC4 421 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 LMNTD1Q8N9Z9 388 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF559Q9BR84 538 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 OR2B2Q9GZK3 357 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 GPN2Q9H9Y4 310 aaPredicted RBP13.73□□□□□ -0.21
CACNB1-206ENST00000539338 CXXC1Q9P0U4 656 aaPredicted RBP13.73□□□□□ -0.21
CACNB1-206ENST00000539338 TMEM189-UBE2V1I3L0A0 370 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 RP2O75695 350 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 RAB3BP20337 219 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 GGT2P36268 569 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 FRKP42685 505 aaPredicted RBP13.73□□□□□ -0.21
CACNB1-206ENST00000539338 GXYLT1Q4G148 440 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 ASTLQ6HA08 431 aaPredicted RBP13.73□□□□□ -0.21
CACNB1-206ENST00000539338 LEG1Q6P5S2 330 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 CHDHQ8NE62 594 aaPredicted RBP13.73□□□□□ -0.21
CACNB1-206ENST00000539338 MZB1Q8WU39 189 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 C17orf50Q8WW18 174 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 ABCD2Q9UBJ2 740 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 COL18A1P39060 1754 aa13.73□□□□□ -0.21
CACNB1-206ENST00000539338 PRRC2BQ5JSZ5 2229 aaKnown RBP13.73□□□□□ -0.21
CACNB1-206ENST00000539338 FAM227AF5H4B4 570 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms