RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 KRT73Q86Y46 540 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 PRR22Q8IZ63 422 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 METTL25Q8N6Q8 603 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 APCDD1LQ8NCL9 501 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 OR4N2Q8NGD1 307 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 PCSK5Q92824 1860 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 LCORQ96JN0 433 aaPredicted RBP13.09□□□□□ -0.31
CD4-208ENST00000538827 COL21A1Q96P44 957 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 ZNF607Q96SK3 696 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 NXF5Q9H1B4 397 aaKnown RBP13.09□□□□□ -0.31
CD4-208ENST00000538827 LIN28AQ9H9Z2 209 aaKnown RBP13.09□□□□□ -0.31
CD4-208ENST00000538827 P4HTMQ9NXG6 502 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 AURKCQ9UQB9 309 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 WDR45Q9Y484 360 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 PCDHGA6Q9Y5G7 932 aa13.09□□□□□ -0.31
CD4-208ENST00000538827 NPIPA5A0A0B4J1W7 369 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 AQP12BA6NM10 295 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 NPIPA7E9PJI5 369 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 H0Y3Z8 333 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 MASP2O00187 686 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 KRT36O76013 467 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 PGM3O95394 542 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 HPP00738 406 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 ALPPP05187 535 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 NPIPA8P0DM63 369 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 KDELR2P33947 212 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 KRT20P35900 424 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 DCAF7P61962 342 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 RNF4P78317 190 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 PLCXD2Q0VAA5 305 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 SRSF6Q13247 344 aaKnown RBP13.08□□□□□ -0.32
CD4-208ENST00000538827 GPR68Q15743 365 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 ARHGAP11BQ3KRB8 267 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 CYBRD1Q53TN4 286 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 HEPHL1Q6MZM0 1159 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 AQP12AQ8IXF9 295 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 CHDHQ8NE62 594 aaPredicted RBP13.08□□□□□ -0.32
CD4-208ENST00000538827 OR10Q1Q8NGQ4 319 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 PYDC1Q8WXC3 89 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 HOXB13Q92826 284 aaPredicted RBP13.08□□□□□ -0.32
CD4-208ENST00000538827 TAMM41Q96BW9 452 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 TPD52L3Q96J77 140 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 RNF145Q96MT1 663 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 DCBLD2Q96PD2 775 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 TRNT1Q96Q11 434 aaKnown RBP13.08□□□□□ -0.32
CD4-208ENST00000538827 LMF1Q96S06 567 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 TREX2Q9BQ50 279 aaPredicted RBP13.08□□□□□ -0.32
CD4-208ENST00000538827 EFHD1Q9BUP0 239 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 DEFB126Q9BYW3 111 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 FAM117AQ9C073 453 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 SEMA4CQ9C0C4 833 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 TRIM45Q9H8W5 580 aaPredicted RBP13.08□□□□□ -0.32
CD4-208ENST00000538827 GORASP2Q9H8Y8 452 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 ADPRHL2Q9NX46 363 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 ANAPC2Q9UJX6 822 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 RPS6KA6Q9UK32 745 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 CBLCQ9ULV8 474 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 SAMD4AQ9UPU9 718 aaKnown RBP13.08□□□□□ -0.32
CD4-208ENST00000538827 GPR55Q9Y2T6 319 aaPredicted RBP13.08□□□□□ -0.32
CD4-208ENST00000538827 EXPH5Q8NEV8 1989 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 COL6A6A6NMZ7 2263 aa13.08□□□□□ -0.32
CD4-208ENST00000538827 PTPRQQ9UMZ3 2332 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 A0A0G2JPF8 293 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 TCRBV5S2A0A599 114 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 TCRBV3S1A0A5B6 114 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 DHRS12A0PJE2 317 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 HNRNPCL2B2RXH8 293 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 HNRNPCL3B7ZW38 293 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 STX11O75558 287 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 ZFAND5O76080 213 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 KCNK2O95069 426 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 IFNA14P01570 189 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 C8BP07358 591 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 HNRNPCL4P0DMR1 293 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 CT45A8P0DMV1 189 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 CT45A9P0DMV2 189 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 PRKAR1AP10644 381 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 PSMA4P25789 261 aaKnown RBP13.07□□□□□ -0.32
CD4-208ENST00000538827 IL12BP29460 328 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 MAP3K8P41279 467 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 PPICP45877 212 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 GPR143P51810 404 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 PCBP3P57721 371 aaKnown RBP13.07□□□□□ -0.32
CD4-208ENST00000538827 CHRNEQ04844 493 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 CLN3Q13286 438 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 DECR1Q16698 335 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 CT45A2Q5DJT8 189 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 PLAG1Q6DJT9 500 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 ENPP6Q6UWR7 440 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 FRRS1Q6ZNA5 592 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 LRRC74BQ6ZQY2 392 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 CCDC80Q76M96 950 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 ARMC8Q8IUR7 673 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 ZNF619Q8N2I2 560 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 ZNF614Q8N883 585 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 BCORP1Q8N888 145 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 SMYD1Q8NB12 490 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 M1APQ8TC57 530 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 ADIPOR1Q96A54 375 aa13.07□□□□□ -0.32
CD4-208ENST00000538827 EFHD2Q96C19 240 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms